You are browsing environment: HUMAN GUT
CAZyme Information: MGYG000001417_01683
You are here: Home > Sequence: MGYG000001417_01683
Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Noviherbaspirillum massiliense | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Proteobacteria; Gammaproteobacteria; Burkholderiales; Burkholderiaceae; Noviherbaspirillum; Noviherbaspirillum massiliense | |||||||||||
| CAZyme ID | MGYG000001417_01683 | |||||||||||
| CAZy Family | AA6 | |||||||||||
| CAZyme Description | p-benzoquinone reductase | |||||||||||
| CAZyme Property |
|
|||||||||||
| Genome Property |
|
|||||||||||
| Gene Location | Start: 1762342; End: 1762962 Strand: - | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| AA6 | 5 | 202 | 6.9e-84 | 0.9897435897435898 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| PRK03767 | PRK03767 | 4.17e-124 | 3 | 205 | 2 | 200 | NAD(P)H:quinone oxidoreductase; Provisional |
| TIGR01755 | flav_wrbA | 2.77e-104 | 3 | 202 | 1 | 196 | NAD(P)H:quinone oxidoreductase, type IV. This model represents a protein, WrbA, related to and slightly larger than flavodoxin. It was just shown, in E. coli and Archaeoglobus fulgidus (and previously for some eukaryotic homologs) to act as fourth type of NAD(P)H:quinone oxidoreductase. In E. coli, this protein was earlier reported to be produced during stationary phase, bind to the trp repressor, and make trp operon repression more efficient. WrbA does not interact with the trp operator by itself. Members are found in species in which homologs of the E. coli trp operon repressor TrpR (SP:P03032) are not detected. [Energy metabolism, Electron transport] |
| COG0655 | WrbA | 1.97e-55 | 1 | 202 | 2 | 204 | Multimeric flavodoxin WrbA [Energy production and conversion]. |
| pfam03358 | FMN_red | 2.52e-14 | 17 | 150 | 17 | 143 | NADPH-dependent FMN reductase. |
| COG0426 | NorV | 1.68e-08 | 4 | 119 | 248 | 338 | Flavorubredoxin [Energy production and conversion]. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QIH44907.1 | 9.50e-61 | 1 | 202 | 1 | 199 |
| CAD1832658.1 | 5.86e-59 | 1 | 202 | 1 | 198 |
| QHO00604.1 | 8.31e-59 | 1 | 202 | 1 | 199 |
| SPT18006.1 | 8.57e-59 | 1 | 202 | 1 | 200 |
| QQY97228.1 | 1.22e-58 | 1 | 202 | 1 | 198 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 4LA4_A | 1.47e-111 | 1 | 204 | 1 | 204 | Crystalstructure of native PnpB [Pseudomonas sp. WBC-3],4LA4_B Crystal structure of native PnpB [Pseudomonas sp. WBC-3],4LAF_A Crystal structure of PnpB complex with FMN [Pseudomonas sp. WBC-3],4LAF_B Crystal structure of PnpB complex with FMN [Pseudomonas sp. WBC-3],4LAF_C Crystal structure of PnpB complex with FMN [Pseudomonas sp. WBC-3],4LAF_D Crystal structure of PnpB complex with FMN [Pseudomonas sp. WBC-3] |
| 4DY4_A | 6.09e-71 | 4 | 202 | 2 | 194 | Highresolution structure of E.coli WrbA with FMN [Escherichia coli APEC O1],4DY4_C High resolution structure of E.coli WrbA with FMN [Escherichia coli APEC O1] |
| 2R96_A | 6.29e-71 | 4 | 202 | 3 | 195 | Crystalstructure of E. coli WrbA in complex with FMN [Escherichia coli],2R96_C Crystal structure of E. coli WrbA in complex with FMN [Escherichia coli],2R97_A Crystal structure of E. coli WrbA in complex with FMN [Escherichia coli],2R97_C Crystal structure of E. coli WrbA in complex with FMN [Escherichia coli],2RG1_A Crystal structure of E. coli WrbA apoprotein [Escherichia coli],2RG1_B Crystal structure of E. coli WrbA apoprotein [Escherichia coli],3B6I_A WrbA from Escherichia coli, native structure [Escherichia coli K-12],3B6I_B WrbA from Escherichia coli, native structure [Escherichia coli K-12],3B6J_A WrbA from Escherichia coli, NADH complex [Escherichia coli K-12],3B6J_B WrbA from Escherichia coli, NADH complex [Escherichia coli K-12],3B6K_A WrbA from Escherichia coli, Benzoquinone complex [Escherichia coli K-12],3B6K_B WrbA from Escherichia coli, Benzoquinone complex [Escherichia coli K-12],3B6M_A WrbA from Escherichia coli, second crystal form [Escherichia coli K-12],3B6M_B WrbA from Escherichia coli, second crystal form [Escherichia coli K-12] |
| 3ZHO_A | 4.96e-70 | 4 | 202 | 2 | 194 | X-raystructure of E.coli Wrba in complex with FMN at 1.2 A resolution [Escherichia coli],3ZHO_B X-ray structure of E.coli Wrba in complex with FMN at 1.2 A resolution [Escherichia coli],4YQE_A Crystal structure of E. coli WrbA in complex with benzoquinone [Escherichia coli K-12],4YQE_B Crystal structure of E. coli WrbA in complex with benzoquinone [Escherichia coli K-12],5F12_A WrbA in complex with FMN under crystallization conditions of WrbA-FMN-BQ structure (4YQE) [Escherichia coli K-12],5F12_B WrbA in complex with FMN under crystallization conditions of WrbA-FMN-BQ structure (4YQE) [Escherichia coli K-12] |
| 5F4B_A | 1.03e-60 | 7 | 202 | 9 | 199 | Structureof B. abortus WrbA-related protein A (WrpA) [Brucella abortus 2308],5F4B_B Structure of B. abortus WrbA-related protein A (WrpA) [Brucella abortus 2308] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| C1I202 | 8.08e-111 | 1 | 204 | 1 | 204 | p-benzoquinone reductase OS=Pseudomonas sp. (strain WBC-3) OX=165468 GN=pnpB PE=1 SV=1 |
| B3E9H6 | 1.48e-103 | 3 | 200 | 2 | 199 | NAD(P)H dehydrogenase (quinone) OS=Trichlorobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) OX=398767 GN=Glov_0105 PE=3 SV=1 |
| Q5P5L5 | 1.82e-100 | 4 | 199 | 2 | 197 | NAD(P)H dehydrogenase (quinone) OS=Aromatoleum aromaticum (strain EbN1) OX=76114 GN=AZOSEA12720 PE=3 SV=1 |
| Q0A961 | 2.29e-92 | 4 | 204 | 3 | 198 | NAD(P)H dehydrogenase (quinone) OS=Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1) OX=187272 GN=Mlg_1277 PE=3 SV=1 |
| Q3J8H5 | 9.63e-92 | 3 | 202 | 2 | 197 | NAD(P)H dehydrogenase (quinone) OS=Nitrosococcus oceani (strain ATCC 19707 / BCRC 17464 / JCM 30415 / NCIMB 11848 / C-107) OX=323261 GN=Noc_2414 PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 1.000039 | 0.000000 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |