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CAZyme Information: MGYG000001417_01732
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Noviherbaspirillum massiliense | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Proteobacteria; Gammaproteobacteria; Burkholderiales; Burkholderiaceae; Noviherbaspirillum; Noviherbaspirillum massiliense | |||||||||||
| CAZyme ID | MGYG000001417_01732 | |||||||||||
| CAZy Family | GH73 | |||||||||||
| CAZyme Description | Peptidoglycan hydrolase FlgJ | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 1813685; End: 1814569 Strand: - | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH73 | 153 | 290 | 1.6e-38 | 0.9609375 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| PRK05684 | flgJ | 2.45e-112 | 1 | 289 | 1 | 295 | flagellar assembly peptidoglycan hydrolase FlgJ. |
| TIGR02541 | flagell_FlgJ | 4.29e-107 | 11 | 288 | 1 | 290 | flagellar rod assembly protein/muramidase FlgJ. The N-terminal region of this protein acts directly in flagellar rod assembly. The C-terminal region is a flagellum-specific muramidase (peptidoglycan hydrolase) required for formation of the outer membrane L ring. |
| PRK12709 | flgJ | 1.52e-106 | 3 | 289 | 6 | 317 | flagellar rod assembly protein/muramidase FlgJ; Provisional |
| PRK12712 | flgJ | 7.18e-92 | 5 | 289 | 10 | 340 | flagellar rod assembly protein/muramidase FlgJ; Provisional |
| PRK12713 | flgJ | 1.25e-78 | 13 | 288 | 17 | 323 | flagellar rod assembly protein/muramidase FlgJ; Provisional |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QAU34350.1 | 1.15e-125 | 1 | 294 | 1 | 339 |
| BBP03830.1 | 1.75e-124 | 1 | 294 | 1 | 286 |
| QDZ28121.1 | 4.87e-122 | 1 | 292 | 1 | 297 |
| QBP75450.1 | 8.55e-117 | 2 | 294 | 5 | 323 |
| QJQ00734.1 | 8.84e-117 | 2 | 294 | 5 | 324 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 3VWO_A | 7.73e-46 | 146 | 288 | 2 | 143 | Crystalstructure of peptidoglycan hydrolase mutant from Sphingomonas sp. A1 [Sphingomonas sp. A1] |
| 2ZYC_A | 1.02e-45 | 146 | 288 | 3 | 144 | ChainA, Peptidoglycan hydrolase FlgJ [Sphingomonas sp. A1] |
| 3K3T_A | 8.06e-45 | 146 | 288 | 3 | 144 | E185Amutant of peptidoglycan hydrolase from Sphingomonas sp. A1 [Sphingomonas sp. A1] |
| 5DN5_A | 3.14e-38 | 148 | 289 | 6 | 146 | Structureof a C-terminally truncated glycoside hydrolase domain from Salmonella typhimurium FlgJ [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2],5DN5_B Structure of a C-terminally truncated glycoside hydrolase domain from Salmonella typhimurium FlgJ [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2],5DN5_C Structure of a C-terminally truncated glycoside hydrolase domain from Salmonella typhimurium FlgJ [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] |
| 5DN4_A | 4.88e-38 | 148 | 289 | 6 | 146 | Structureof the glycoside hydrolase domain from Salmonella typhimurium FlgJ [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| P75942 | 3.49e-65 | 1 | 293 | 1 | 296 | Peptidoglycan hydrolase FlgJ OS=Escherichia coli (strain K12) OX=83333 GN=flgJ PE=3 SV=1 |
| P58231 | 4.93e-65 | 1 | 293 | 1 | 296 | Peptidoglycan hydrolase FlgJ OS=Escherichia coli O157:H7 OX=83334 GN=flgJ PE=3 SV=1 |
| P15931 | 3.02e-61 | 1 | 289 | 1 | 295 | Peptidoglycan hydrolase FlgJ OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) OX=99287 GN=flgJ PE=1 SV=1 |
| Q9KQ15 | 1.50e-49 | 1 | 287 | 1 | 302 | Peptidoglycan hydrolase FlgJ OS=Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) OX=243277 GN=flgJ PE=3 SV=2 |
| Q9X9J3 | 3.32e-48 | 11 | 287 | 10 | 301 | Peptidoglycan hydrolase FlgJ OS=Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633) OX=223926 GN=flgJ PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 1.000053 | 0.000000 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |