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CAZyme Information: MGYG000001420_00169

You are here: Home > Sequence: MGYG000001420_00169

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Alistipes senegalensis
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; Alistipes senegalensis
CAZyme ID MGYG000001420_00169
CAZy Family GH28
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
511 MGYG000001420_1|CGC4 55768.78 6.1001
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001420 3985129 Isolate not provided not provided
Gene Location Start: 211086;  End: 212621  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001420_00169.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 165 490 2.3e-60 0.9138461538461539

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG5434 Pgu1 3.30e-40 132 421 74 393
Polygalacturonase [Carbohydrate transport and metabolism].
pfam00295 Glyco_hydro_28 2.48e-11 230 352 39 171
Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.
PLN03003 PLN03003 1.68e-08 228 352 102 222
Probable polygalacturonase At3g15720
PLN03010 PLN03010 4.15e-06 232 348 132 236
polygalacturonase
PLN02218 PLN02218 5.33e-05 226 355 143 279
polygalacturonase ADPG

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ADY51373.1 8.53e-174 33 511 36 518
ADY51372.1 6.14e-153 44 509 34 505
ADY51374.1 8.37e-107 44 508 41 491
QIF01889.1 3.13e-77 60 511 57 504
ADY51377.1 2.96e-61 44 496 41 494

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
A7PZL3 3.15e-14 137 393 73 326
Probable polygalacturonase OS=Vitis vinifera OX=29760 GN=GSVIVT00026920001 PE=1 SV=1
P27644 1.66e-09 257 417 10 177
Polygalacturonase OS=Rhizobium radiobacter OX=358 GN=pgl PE=2 SV=1
Q9LW07 1.69e-08 228 379 102 270
Probable polygalacturonase At3g15720 OS=Arabidopsis thaliana OX=3702 GN=At3g15720 PE=3 SV=1
P15922 8.44e-08 135 498 146 565
Exo-poly-alpha-D-galacturonosidase OS=Dickeya chrysanthemi OX=556 GN=pehX PE=1 SV=1
P20041 2.91e-06 155 350 74 314
Polygalacturonase OS=Ralstonia solanacearum OX=305 GN=pglA PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as LIPO

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000279 0.117482 0.882050 0.000067 0.000059 0.000059

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001420_00169.