CAZyme Information: MGYG000001420_00303

Basic Information

• Species: Alistipes senegalensis
• Lineage: Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; Alistipes senegalensis
• CAZyme ID: MGYG000001420_00303
• CAZy Family: GH127
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
673	MGYG000001420_1|CGC6	76185.74	6.397

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000001420	3985129	Isolate	not provided	not provided

• Gene Location: Start: 399822; End: 401843 Strand: +

Full Sequence      

MKPIRLIFALCSLAVAAAVSAQPDTRFNRAPLQPRPYAELPIGAVKPAGWLNEQLVRMRD
GMTGHLDSLYPQVMGPRNGWLGGDGDVWERGPYWIDGLLPLAYILEDRRLIAKVQPWIEW
ALASQTADGNFGPVTDRPAEPGLQRDKARDWWPRMVVLKVLQQYHSATGDPRVLDFMGRY
FRYQLAQLPRTPLDNWTKWGRVRGGDNLAVVYWLYNLTGEKFLLELGELIHKQTFDWTGT
FLHGDHLSRPYSLHCVDLGQGFKEPVVYWQQSGDSRHIEAVGRAVEKMRHTIGLPTGLWA
GDEKLRFGDPTLGSELCTAVEMMFSLEQILQITGGREWGDYLERVAYNALPTQTTDAQDA
RQYYQQVNQVEVTRKVRPFSTPHEDTDIVFGLYTGYPCCTSNLHQGWPKLVQNLWYATRD
GGLAALVYAPSKVETTVGGRSVVIEERTDYPFRERIAFCVTLPGAGKRATAAFPLHLRIP
GWCAEPEITLNGEKVAFRSAGEGIVVVEREWRSGDCLNLTFPAQVAVSRWYNEAAVVERG
PLVYALRMNEKWERHAMEPEKQTLYGPYYYEVTSDSPWNYCLPKANVRPEKVAESFVVED
AGEMAPYPWTPDGSPVKIRTQAHRIGDWTLHGGSAGPIAFVSSQQMYMTPEAEWIELIPY
GCTTLRVTEFPVR

Enzyme Prediction     

No EC number prediction in MGYG000001420_00303.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH127	314	545	1.2e-34	0.4255725190839695

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam07944	Glyco_hydro_127	5.81e-56	78	545	51	503	Beta-L-arabinofuranosidase, GH127. One member of this family, from Bidobacterium longicum, UniProtKB:E8MGH8, has been characterized as an unusual beta-L-arabinofuranosidase enzyme, EC:3.2.1.185. It rleases l-arabinose from the l-arabinofuranose (Araf)-beta1,2-Araf disaccharide and also transglycosylates 1-alkanols with retention of the anomeric configuration. Terminal beta-l-arabinofuranosyl residues have been found in arabinogalactan proteins from a mumber of different plantt species. beta-l-Arabinofuranosyl linkages with 1-4 arabinofuranosides are also found in the sugar chains of extensin and solanaceous lectins, hydroxyproline (Hyp)2-rich glycoproteins that are widely observed in plant cell wall fractions. The critical residue for catalytic activity is Glu-338, in a ET/SCAS sequence context.
COG3533	COG3533	1.07e-25	164	546	143	502	Uncharacterized conserved protein, DUF1680 family [Function unknown].

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
ACU60445.1	1.22e-144	18	672	18	650
AMP98056.1	3.06e-142	2	672	5	650
ALL07583.1	3.06e-142	27	672	30	650
QNK64903.1	2.26e-141	6	672	3	644
QHS59113.1	4.48e-141	17	672	20	650

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
4QJY_A	7.97e-23	37	546	26	561	Crystalstructure of native Ara127N, a GH127 beta-L-arabinofuranosidase from Geobacillus Stearothermophilus T6 [Geobacillus stearothermophilus],4QJY_B Crystal structure of native Ara127N, a GH127 beta-L-arabinofuranosidase from Geobacillus Stearothermophilus T6 [Geobacillus stearothermophilus]
4QK0_A	1.40e-22	37	546	26	561	Crystalstructure of Ara127N-Se, a GH127 beta-L-arabinofuranosidase from Geobacillus Stearothermophilus T6 [Geobacillus stearothermophilus],4QK0_B Crystal structure of Ara127N-Se, a GH127 beta-L-arabinofuranosidase from Geobacillus Stearothermophilus T6 [Geobacillus stearothermophilus],4QK0_C Crystal structure of Ara127N-Se, a GH127 beta-L-arabinofuranosidase from Geobacillus Stearothermophilus T6 [Geobacillus stearothermophilus],4QK0_D Crystal structure of Ara127N-Se, a GH127 beta-L-arabinofuranosidase from Geobacillus Stearothermophilus T6 [Geobacillus stearothermophilus]
3WRE_A	1.48e-11	311	544	334	565	Thecrystal structure of native HypBA1 from Bifidobacterium longum JCM 1217 [Bifidobacterium longum subsp. longum JCM 1217],3WRG_A The complex structure of HypBA1 with L-arabinose [Bifidobacterium longum subsp. longum JCM 1217]
3WKW_A	1.50e-11	311	544	334	565	Crystalstructure of GH127 beta-L-arabinofuranosidase HypBA1 from Bifidobacterium longum ligand free form [Bifidobacterium longum subsp. longum JCM 1217],3WKX_A Crystal structure of GH127 beta-L-arabinofuranosidase HypBA1 from Bifidobacterium longum arabinose complex form [Bifidobacterium longum subsp. longum JCM 1217],7BZL_A Chain A, Non-reducing end beta-L-arabinofuranosidase [Bifidobacterium longum subsp. longum JCM 1217],7DIF_A Chain A, Non-reducing end beta-L-arabinofuranosidase [Bifidobacterium longum subsp. longum JCM 1217],7EXV_A Chain A, Non-reducing end beta-L-arabinofuranosidase [Bifidobacterium longum subsp. longum JCM 1217],7EXW_A Chain A, Non-reducing end beta-L-arabinofuranosidase [Bifidobacterium longum subsp. longum JCM 1217]
7EXU_A	1.50e-11	311	544	334	565	ChainA, Non-reducing end beta-L-arabinofuranosidase [Bifidobacterium longum subsp. longum JCM 1217]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
E8MGH8	8.09e-11	311	544	334	565	Non-reducing end beta-L-arabinofuranosidase OS=Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 / JCM 1217 / NCTC 11818 / E194b) OX=565042 GN=hypBA1 PE=1 SV=1

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000339	0.998942	0.000194	0.000167	0.000164	0.000153

TMHMM  Annotations     

There is no transmembrane helices in MGYG000001420_00303.