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CAZyme Information: MGYG000001420_00717

You are here: Home > Sequence: MGYG000001420_00717

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Alistipes senegalensis
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; Alistipes senegalensis
CAZyme ID MGYG000001420_00717
CAZy Family GH105
CAZyme Description Unsaturated rhamnogalacturonyl hydrolase YteR
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
409 MGYG000001420_1|CGC13 45821.13 4.9604
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001420 3985129 Isolate not provided not provided
Gene Location Start: 925182;  End: 926411  Strand: +

Full Sequence      Download help

MKRLLIPALC  VLAAACTSRG  HLYDSATPLA  VRMVESEIAR  NPSPMTLDGI  PAGKIKWNYT60
TGLELLAMMD  AGEAYDRPDF  FDYALRYYDS  IVQPDGSVLT  YKKSKYNLDH  VCPGRALFAL120
YDRTGDVRYK  TALDTLFAQL  REQPRNDDGG  FWHKEVYPHQ  MWLDGLYMAE  PFYAEYAARN180
LSGAEYEKAV  DDIVNQFVAA  AAHTFDPATK  LYRHACDVSR  EMFWCDKTTG  QSAHAWGRAM240
GWYVMAIVET  LQYLGVNDTT  LPMIDILNHI  CEVLPEYADP  ATGMWYQVLD  QPGREGNYLE300
STASAMFVYA  MLKGVRLGYL  PAEMGAEARR  LYEKFVDRFV  KENPDGTISL  TDCCSVAGLG360
GKGMRSGTFE  YYISEPVIDN  DCKGVGPFIW  ASLEYSLPAK  SRDSGAAVR409

Enzyme Prediction      help

No EC number prediction in MGYG000001420_00717.

CAZyme Signature Domains help

Created with Snap2040618110212214316318420422424526528630632734736838855395GH105
Family Start End Evalue family coverage
GH105 55 395 2.1e-111 0.9608433734939759

CDD Domains      download full data without filtering help

Created with Snap2040618110212214316318420422424526528630632734736838830395Glyco_hydro_8857395YesR
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam07470 Glyco_hydro_88 2.59e-95 30 395 2 339
Glycosyl Hydrolase Family 88. Unsaturated glucuronyl hydrolase catalyzes the hydrolytic release of unsaturated glucuronic acids from oligosaccharides (EC:3.2.1.-) produced by the reactions of polysaccharide lyases.
COG4225 YesR 6.85e-82 57 395 34 353
Rhamnogalacturonyl hydrolase YesR [Carbohydrate transport and metabolism].

CAZyme Hits      help

Created with Snap204061811021221431631842042242452652863063273473683881399CBK63671.1|GH1056395SCV08369.1|GH1056395QUR41787.1|GH1056395QRQ55761.1|GH1056395QUT32871.1|GH105
Hit ID E-Value Query Start Query End Hit Start Hit End
CBK63671.1 1.26e-251 1 399 1 400
SCV08369.1 2.28e-135 6 395 11 394
QUR41787.1 2.28e-135 6 395 11 394
QRQ55761.1 2.28e-135 6 395 11 394
QUT32871.1 2.28e-135 6 395 11 394

PDB Hits      download full data without filtering help

Created with Snap20406181102122143163184204224245265286306327347368388433954WU0_A463941NC5_A463942GH4_A1073234XUV_A1073513QWT_A
Hit ID E-Value Query Start Query End Hit Start Hit End Description
4WU0_A 3.18e-98 43 395 5 358
StructuralAnalysis of C. acetobutylicum ATCC 824 Glycoside Hydrolase From Family 105 [Clostridium acetobutylicum ATCC 824],4WU0_B Structural Analysis of C. acetobutylicum ATCC 824 Glycoside Hydrolase From Family 105 [Clostridium acetobutylicum ATCC 824]
1NC5_A 1.26e-62 46 394 29 363
Structureof Protein of Unknown Function of YteR from Bacillus Subtilis [Bacillus subtilis],2D8L_A Crystal Structure of Unsaturated Rhamnogalacturonyl Hydrolase in complex with dGlcA-GalNAc [Bacillus subtilis]
2GH4_A 5.29e-62 46 394 19 353
ChainA, Putative glycosyl hydrolase yteR [Bacillus subtilis]
4XUV_A 6.73e-11 107 323 90 308
Crystalstructure of a glycoside hydrolase family 105 (GH105) enzyme from Thielavia terrestris [Thermothielavioides terrestris NRRL 8126],4XUV_B Crystal structure of a glycoside hydrolase family 105 (GH105) enzyme from Thielavia terrestris [Thermothielavioides terrestris NRRL 8126]
3QWT_A 2.20e-10 107 351 108 341
ChainA, Putative GH105 family protein [Salmonella enterica subsp. enterica serovar Paratyphi A],3QWT_B Chain B, Putative GH105 family protein [Salmonella enterica subsp. enterica serovar Paratyphi A],3QWT_C Chain C, Putative GH105 family protein [Salmonella enterica subsp. enterica serovar Paratyphi A],3QWT_D Chain D, Putative GH105 family protein [Salmonella enterica subsp. enterica serovar Paratyphi A]

Swiss-Prot Hits      download full data without filtering help

Created with Snap2040618110212214316318420422424526528630632734736838846394sp|O34559|URHG2_BACSU190400sp|P0A3U6|PIC1_AGRFC190400sp|P0A3U7|PIC1_RHIRD
Hit ID E-Value Query Start Query End Hit Start Hit End Description
O34559 6.89e-62 46 394 29 363
Unsaturated rhamnogalacturonyl hydrolase YteR OS=Bacillus subtilis (strain 168) OX=224308 GN=yteR PE=1 SV=1
P0A3U6 1.73e-36 190 400 19 233
Protein Atu3128 OS=Agrobacterium fabrum (strain C58 / ATCC 33970) OX=176299 GN=Atu3128 PE=3 SV=1
P0A3U7 1.73e-36 190 400 19 233
24.9 kDa protein in picA locus OS=Rhizobium radiobacter OX=358 PE=2 SV=1

SignalP and Lipop Annotations help

This protein is predicted as LIPO

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000000 0.000000 1.000052 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001420_00717.