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CAZyme Information: MGYG000001420_00797

You are here: Home > Sequence: MGYG000001420_00797

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Alistipes senegalensis
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; Alistipes senegalensis
CAZyme ID MGYG000001420_00797
CAZy Family GH2
CAZyme Description Beta-galactosidase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
905 MGYG000001420_1|CGC15 103852.34 6.2246
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001420 3985129 Isolate not provided not provided
Gene Location Start: 1028714;  End: 1031431  Strand: +

Full Sequence      Download help

MKNRFLKLFL  AIVFLETFPS  ASAQTCEVDL  SGEWRFQTDV  MDFRRGSLSP  RYNHELQETI60
TLPGITDDYK  IGYESPYRHV  DRLTRVYEYM  GPAWYQRDIE  FPADWKGKRI  FLYFERTHWL120
SSVWVDTKEV  SRIDYISVPH  NHDLTDFVTP  GKTHRITVCI  DNRFQYNTHK  WDHAHTEFTQ180
INWNGILGEM  KLVAVDPVFV  EDMQLYPRIS  DRSVEVRMTI  ANHTRKPFEG  KALFTVSGNG240
LELTREVPVS  GDGETADLTE  RIPLGRDAKL  WDEFDPNLYT  VTCRLATTAG  GRACEHEKSA300
VFGLREVAQG  RNHVLLNGRP  IHLRGTVENA  VFPKTGHAPL  DDAEWERIMR  IVKEYGLNHV360
RFHSWCPPAA  AFRMADKYGV  YFEIEMPMWG  KDAEPDEARY  DFFRREMRAI  LREYGNHPSF420
VLYCNGNEIT  GNFDFIEELT  SDGRKLDTRH  LYSGSTARTR  VPSDQYYVSQ  QTNKGPVKVY480
EGRPSTDWDR  SVESDVDVPV  ISHESGQRCV  YPDFREIEKF  TGPVQARNFE  LWREMLEANG540
MLDQAHDFFR  ASGALTVVEY  KAVIEALLRS  SKSAGFQLLS  LNDFPGQGYA  PVGVLDPFWD600
SKGLVTPEDW  RAFCAPTVAL  LRYPKSAWFC  DETFTAKAEV  YNFSGSALRN  AKIRWSMTDS660
AGKTVARGSL  KTQTVGVDGV  FPVGEFSIPL  NKVEGAQKMT  VHLSVGGEIG  NSWDIWVFPR720
NPSLMRSDDD  VLYTTEFDDR  AKSYLAAGKK  VVFTPAPGKV  KGRKSTFHNH  FWNPIMFAWA780
PMTIGCLIHA  DEPVFADFPT  SYHTDWQWWD  ILENAKVIEM  QQTPRELRPF  IQVIDSFDNN840
EKLGIGFEAR  VGGGRLLVLA  VDTRKKLDER  PATRQLLESI  DKYVRSDRFD  PQVELDESFI900
RSFVR905

Enzyme Prediction      help

No EC number prediction in MGYG000001420_00797.

CAZyme Signature Domains help

Created with Snap459013518122627131636240745249754358863367872476981485927490GH2
Family Start End Evalue family coverage
GH2 27 490 7e-73 0.5106382978723404

CDD Domains      download full data without filtering help

Created with Snap459013518122627131636240745249754358863367872476981485929447PRK1015029466LacZ30162Glyco_hydro_2_N198305Glyco_hydro_295474ebgA
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PRK10150 PRK10150 3.70e-18 29 447 14 440
beta-D-glucuronidase; Provisional
COG3250 LacZ 9.07e-18 29 466 14 446
Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism].
pfam02837 Glyco_hydro_2_N 3.93e-09 30 162 4 135
Glycosyl hydrolases family 2, sugar binding domain. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities and has a jelly-roll fold. The domain binds the sugar moiety during the sugar-hydrolysis reaction.
pfam00703 Glyco_hydro_2 4.59e-09 198 305 1 106
Glycosyl hydrolases family 2. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities.
PRK10340 ebgA 5.70e-07 95 474 113 506
cryptic beta-D-galactosidase subunit alpha; Reviewed

CAZyme Hits      help

Created with Snap45901351812262713163624074524975435886336787247698148591905CBK63994.1|GH26904QPH40113.1|GH26904AZI26708.1|GH228904QIH37197.1|GH228904VTR43024.1|GH2
Hit ID E-Value Query Start Query End Hit Start Hit End
CBK63994.1 0.0 1 905 1 905
QPH40113.1 0.0 6 904 7 906
AZI26708.1 0.0 6 904 7 906
QIH37197.1 0.0 28 904 20 896
VTR43024.1 0.0 28 904 28 904

PDB Hits      download full data without filtering help

Created with Snap4590135181226271316362407452497543588633678724769814859344663GM8_A183907KGY_A794295UJ6_A794296D50_A304476LEM_B
Hit ID E-Value Query Start Query End Hit Start Hit End Description
3GM8_A 2.31e-20 34 466 13 436
ChainA, Glycoside hydrolase family 2, candidate beta-glycosidase [Phocaeicola vulgatus ATCC 8482]
7KGY_A 1.08e-19 18 390 8 360
ChainA, Beta-glucuronidase [Faecalibacterium prausnitzii],7KGY_B Chain B, Beta-glucuronidase [Faecalibacterium prausnitzii],7KGY_C Chain C, Beta-glucuronidase [Faecalibacterium prausnitzii],7KGY_D Chain D, Beta-glucuronidase [Faecalibacterium prausnitzii]
5UJ6_A 2.84e-16 79 429 64 419
CrystalStructure of Bacteroides Uniformis beta-glucuronidase [Bacteroides uniformis str. 3978 T3 ii],5UJ6_B Crystal Structure of Bacteroides Uniformis beta-glucuronidase [Bacteroides uniformis str. 3978 T3 ii],6NZG_A Bacteroides uniformis beta-glucuronidase 2 covalently bound to cyclophellitol-6-carboxylate aziridine [Bacteroides uniformis],6NZG_B Bacteroides uniformis beta-glucuronidase 2 covalently bound to cyclophellitol-6-carboxylate aziridine [Bacteroides uniformis]
6D50_A 2.86e-16 79 429 72 427
Bacteroidesuniforms beta-glucuronidase 2 bound to D-glucaro-1,5-lactone [Bacteroides uniformis str. 3978 T3 ii],6D50_B Bacteroides uniforms beta-glucuronidase 2 bound to D-glucaro-1,5-lactone [Bacteroides uniformis str. 3978 T3 ii]
6LEM_B 4.49e-16 30 447 13 434
ChainB, Beta-D-glucuronidase [Escherichia coli]

Swiss-Prot Hits      download full data without filtering help

Created with Snap459013518122627131636240745249754358863367872476981485930447sp|P05804|BGLR_ECOLI119428sp|Q6LL68|BGAL_PHOPR119428sp|Q8D4H3|BGAL_VIBVU22504sp|T2KN75|PLH17_FORAG30428sp|Q6D736|BGAL_PECAS
Hit ID E-Value Query Start Query End Hit Start Hit End Description
P05804 2.47e-15 30 447 15 436
Beta-glucuronidase OS=Escherichia coli (strain K12) OX=83333 GN=uidA PE=1 SV=2
Q6LL68 1.52e-14 119 428 149 456
Beta-galactosidase OS=Photobacterium profundum (strain SS9) OX=298386 GN=lacZ PE=3 SV=1
Q8D4H3 3.46e-14 119 428 150 458
Beta-galactosidase OS=Vibrio vulnificus (strain CMCP6) OX=216895 GN=lacZ PE=3 SV=2
T2KN75 4.43e-14 22 504 23 500
Beta-glucuronidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22060 PE=1 SV=1
Q6D736 4.56e-14 30 428 63 472
Beta-galactosidase OS=Pectobacterium atrosepticum (strain SCRI 1043 / ATCC BAA-672) OX=218491 GN=lacZ PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000540 0.998137 0.000463 0.000268 0.000266 0.000271

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001420_00797.