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CAZyme Information: MGYG000001420_00839

You are here: Home > Sequence: MGYG000001420_00839

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Alistipes senegalensis
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; Alistipes senegalensis
CAZyme ID MGYG000001420_00839
CAZy Family GH2
CAZyme Description Beta-galactosidase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
606 MGYG000001420_1|CGC16 68235.17 7.4512
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001420 3985129 Isolate not provided not provided
Gene Location Start: 1095005;  End: 1096825  Strand: -

Full Sequence      Download help

MRKTILTTVA  ALSVLCTFAQ  WKPAGDKLKT  PWAEKIDPAN  VLPEYPRPQL  VRSQWMNLNG60
LWDYAIKPAG  ALEPKTMDGK  ILVPFAVESS  LSGVQKSLTE  KDELWYRRTF  SVPAAWKGSN120
VMLNFGAVDW  KADVFVNDIL  VGSHTGGFTP  FSLDITPCLK  AKGDQKLVVR  VFDGTDKGYQ180
PRGKQALNPN  GIWYTPVSGI  WQTVWIEPVA  KSHISGIKAI  PNLDQKNIAV  TVTADNCTTG240
DLVEVNILDK  GKVVASATGF  PGSPLRLAIA  EPKLWSPDSP  FLYDMTAELK  RGGKTVDKVD300
SYTAMRKIGT  ARDKAGILRM  TLNDEPLFHY  GPLDQGWWPD  GLFTAPTDEA  LLFDIVKAKE360
LGYNMIRKHV  KVEPARWYYH  CDREGILVWQ  DMPSGDMGNK  WEMYIYNGGT  DKLRTQESKD420
NFSKEWKEIM  DFCISSPSVV  VWVPFNEAWG  QFDTERIVNW  TMEYDPSRLV  NPASGGNHRP480
CGHMLDLHHY  PGPAMKLFDP  QRVNVLGEYG  GIGLALEGHL  WWNKRNWGYV  QFKNAEQVTA540
EYEKYARNLA  KFVRLGFSGA  VYTQTTDVES  EVNGLFTYDR  KVMKVIPERI  KAANEAVIRS600
MSLEME606

Enzyme Prediction      help

No EC number prediction in MGYG000001420_00839.

CAZyme Signature Domains help

Created with Snap30609012115118121224227230333336339342445448451554557550483GH2
Family Start End Evalue family coverage
GH2 50 483 3.9e-101 0.4920212765957447

CDD Domains      download full data without filtering help

Created with Snap30609012115118121224227230333336339342445448451554557547471PRK10150103471LacZ58204Glyco_hydro_2_N106308ebgA106388lacZ
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PRK10150 PRK10150 5.68e-34 47 471 3 449
beta-D-glucuronidase; Provisional
COG3250 LacZ 1.54e-29 103 471 64 430
Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism].
pfam02837 Glyco_hydro_2_N 8.45e-15 58 204 4 163
Glycosyl hydrolases family 2, sugar binding domain. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities and has a jelly-roll fold. The domain binds the sugar moiety during the sugar-hydrolysis reaction.
PRK10340 ebgA 9.67e-15 106 308 113 320
cryptic beta-D-galactosidase subunit alpha; Reviewed
PRK09525 lacZ 1.11e-14 106 388 124 410
beta-galactosidase.

CAZyme Hits      help

Created with Snap3060901211511812122422723033333633934244544845155455751606CBK64944.1|GH21602AST54135.1|GH21602QUT94725.1|GH21602BBK91716.1|GH21602QIX63623.1|GH2
Hit ID E-Value Query Start Query End Hit Start Hit End
CBK64944.1 0.0 1 606 1 606
AST54135.1 0.0 1 602 1 603
QUT94725.1 0.0 1 602 1 603
BBK91716.1 0.0 1 602 1 603
QIX63623.1 0.0 1 602 1 603

PDB Hits      download full data without filtering help

Created with Snap306090121151181212242272303333363393424454484515545575196017SF2_A584726ECA_A544684JKM_A454476ED2_A1054703GM8_A
Hit ID E-Value Query Start Query End Hit Start Hit End Description
7SF2_A 1.51e-271 19 601 3 586
ChainA, Glycosyl hydrolase family 2, sugar binding domain protein [Bacteroides cellulosilyticus DSM 14838],7SF2_B Chain B, Glycosyl hydrolase family 2, sugar binding domain protein [Bacteroides cellulosilyticus DSM 14838],7SF2_C Chain C, Glycosyl hydrolase family 2, sugar binding domain protein [Bacteroides cellulosilyticus DSM 14838],7SF2_D Chain D, Glycosyl hydrolase family 2, sugar binding domain protein [Bacteroides cellulosilyticus DSM 14838],7SF2_E Chain E, Glycosyl hydrolase family 2, sugar binding domain protein [Bacteroides cellulosilyticus DSM 14838],7SF2_F Chain F, Glycosyl hydrolase family 2, sugar binding domain protein [Bacteroides cellulosilyticus DSM 14838]
6ECA_A 1.83e-24 58 472 43 463
Lactobacillusrhamnosus Beta-glucuronidase [Lacticaseibacillus rhamnosus],6ECA_B Lactobacillus rhamnosus Beta-glucuronidase [Lacticaseibacillus rhamnosus]
4JKM_A 1.24e-23 54 468 14 441
CrystalStructure of Clostridium perfringens beta-glucuronidase [Clostridium perfringens str. 13],4JKM_B Crystal Structure of Clostridium perfringens beta-glucuronidase [Clostridium perfringens str. 13],6CXS_A Crystal Structure of Clostridium perfringens beta-glucuronidase bound with a novel, potent inhibitor 4-(8-(piperazin-1-yl)-1,2,3,4-tetrahydro-[1,2,3]triazino[4',5':4,5]thieno[2,3-c]isoquinolin-5-yl)morpholine [Clostridium perfringens str. 13],6CXS_B Crystal Structure of Clostridium perfringens beta-glucuronidase bound with a novel, potent inhibitor 4-(8-(piperazin-1-yl)-1,2,3,4-tetrahydro-[1,2,3]triazino[4',5':4,5]thieno[2,3-c]isoquinolin-5-yl)morpholine [Clostridium perfringens str. 13]
6ED2_A 7.49e-23 45 447 30 441
ChainA, Glycosyl hydrolase family 2, TIM barrel domain protein [Faecalibacterium duncaniae]
3GM8_A 1.81e-22 105 470 69 421
ChainA, Glycoside hydrolase family 2, candidate beta-glycosidase [Phocaeicola vulgatus ATCC 8482]

Swiss-Prot Hits      download full data without filtering help

Created with Snap306090121151181212242272303333363393424454484515545575105520sp|P77989|BGAL_THEP3105475sp|T2KM09|PLH16_FORAG105456sp|T2KPJ7|PLH8_FORAG104466sp|T2KN75|PLH17_FORAG104470sp|P05804|BGLR_ECOLI
Hit ID E-Value Query Start Query End Hit Start Hit End Description
P77989 4.09e-23 105 520 59 441
Beta-galactosidase OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) OX=340099 GN=lacZ PE=3 SV=2
T2KM09 3.93e-22 105 475 109 459
Putative beta-glucuronidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22050 PE=2 SV=2
T2KPJ7 3.13e-21 105 456 106 439
Putative beta-glucuronidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_21970 PE=2 SV=1
T2KN75 1.68e-18 104 466 89 457
Beta-glucuronidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22060 PE=1 SV=1
P05804 3.40e-14 104 470 67 441
Beta-glucuronidase OS=Escherichia coli (strain K12) OX=83333 GN=uidA PE=1 SV=2

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.001189 0.699902 0.298157 0.000312 0.000229 0.000206

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001420_00839.