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CAZyme Information: MGYG000001422_02619

You are here: Home > Sequence: MGYG000001422_02619

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Bacteroides oleiciplenus
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; Bacteroides oleiciplenus
CAZyme ID MGYG000001422_02619
CAZy Family CBM13
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
935 MGYG000001422_2|CGC28 103074.89 5.1478
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001422 7071122 Isolate not provided Asia
Gene Location Start: 1308052;  End: 1310859  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001422_02619.

CAZyme Signature Domains help

Family Start End Evalue family coverage
CBM13 397 551 2.6e-19 0.776595744680851

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam13385 Laminin_G_3 1.86e-28 681 836 1 151
Concanavalin A-like lectin/glucanases superfamily. This domain belongs to the Concanavalin A-like lectin/glucanases superfamily.
pfam14200 RicinB_lectin_2 1.46e-14 435 533 1 89
Ricin-type beta-trefoil lectin domain-like.
pfam14200 RicinB_lectin_2 1.55e-13 393 482 7 89
Ricin-type beta-trefoil lectin domain-like.
pfam14200 RicinB_lectin_2 2.23e-10 488 562 1 81
Ricin-type beta-trefoil lectin domain-like.
TIGR04183 Por_Secre_tail 8.72e-10 868 934 9 72
Por secretion system C-terminal sorting domain. Species that include Porphyromonas gingivalis, Fibrobacter succinogenes, Flavobacterium johnsoniae, Cytophaga hutchinsonii, Gramella forsetii, Prevotella intermedia, and Salinibacter ruber average twenty or more copies of a C-terminal domain, represented by this model, associated with sorting to the outer membrane and covalent modification.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ALJ60208.1 0.0 1 935 1 940
QUT88791.1 0.0 1 935 1 940
ASB47762.1 2.37e-312 35 934 31 932
APZ45922.1 1.19e-252 21 935 10 930
AUC19784.1 1.19e-252 21 935 10 930

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4QVS_A 1.80e-16 643 839 7 220
ChainA, S-layer domain-containing protein [Acetivibrio thermocellus ATCC 27405]
5HON_A 1.97e-10 641 840 5 206
Structureof Domain 4 of AbnA, a GH43 extracellular arabinanase from Geobacillus stearothermophilus, in complex with arabinotriose [Geobacillus stearothermophilus],5HON_B Structure of Domain 4 of AbnA, a GH43 extracellular arabinanase from Geobacillus stearothermophilus, in complex with arabinotriose [Geobacillus stearothermophilus]
5HO0_A 9.93e-10 515 840 498 845
Crystalstructure of AbnA (closed conformation), a GH43 extracellular arabinanase from Geobacillus stearothermophilus [Geobacillus stearothermophilus],5HO2_A Crystal structure of AbnA (open conformation), a GH43 extracellular arabinanase from Geobacillus stearothermophilus [Geobacillus stearothermophilus],5HOF_A Crystal structure of AbnA, a GH43 extracellular arabinanase from Geobacillus stearothermophilus, in complex with arabinopentaose [Geobacillus stearothermophilus],5HP6_A Structure of AbnA, a GH43 extracellular arabinanase from Geobacillus stearothermophilus (a new conformational state) [Geobacillus stearothermophilus]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.002264 0.959781 0.036878 0.000592 0.000268 0.000197

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001422_02619.