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CAZyme Information: MGYG000001422_03468

You are here: Home > Sequence: MGYG000001422_03468

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Bacteroides oleiciplenus
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; Bacteroides oleiciplenus
CAZyme ID MGYG000001422_03468
CAZy Family GH28
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
464 MGYG000001422_4|CGC2 52430.1 6.1906
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001422 7071122 Isolate not provided Asia
Gene Location Start: 78943;  End: 80337  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001422_03468.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 187 447 9.3e-44 0.76

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam00295 Glyco_hydro_28 2.73e-10 191 445 88 307
Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.
COG5434 Pgu1 5.43e-10 188 395 218 421
Polygalacturonase [Carbohydrate transport and metabolism].
PLN02793 PLN02793 1.10e-05 213 377 229 396
Probable polygalacturonase
COG5434 Pgu1 2.71e-05 134 443 129 368
Polygalacturonase [Carbohydrate transport and metabolism].
PLN03010 PLN03010 0.003 171 379 115 311
polygalacturonase

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QUT92200.1 6.09e-309 13 464 10 461
QUU00181.1 1.95e-308 1 464 1 464
ALJ62050.1 1.01e-307 13 464 10 461
QUT34117.1 2.08e-303 1 464 1 464
QJR77942.1 8.62e-296 1 464 1 464

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
B8MW78 1.08e-07 192 443 254 478
Probable endopolygalacturonase D OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=pgaD PE=3 SV=1
Q2UT29 1.08e-07 192 443 254 478
Probable endopolygalacturonase D OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=pgaD PE=3 SV=2

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000214 0.999151 0.000191 0.000142 0.000141 0.000135

TMHMM  Annotations      download full data without filtering help

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