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CAZyme Information: MGYG000001426_04196

You are here: Home > Sequence: MGYG000001426_04196

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytobacter massiliensis
Lineage Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Phytobacter; Phytobacter massiliensis
CAZyme ID MGYG000001426_04196
CAZy Family GH0
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1258 MGYG000001426_5|CGC6 140327.44 5.895
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001426 4922332 Isolate not provided not provided
Gene Location Start: 244284;  End: 248060  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001426_04196.

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
cd04950 GT4_TuaH-like 3.21e-120 395 754 7 373
teichuronic acid biosynthesis glycosyltransferase TuaH and similar proteins. Members of this family may function in teichuronic acid biosynthesis/cell wall biogenesis. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
COG1232 HemY 2.76e-39 792 1250 4 444
Protoporphyrinogen oxidase [Coenzyme transport and metabolism].
PRK07208 PRK07208 7.90e-38 792 1246 8 455
hypothetical protein; Provisional
cd03801 GT4_PimA-like 2.64e-13 486 751 91 366
phosphatidyl-myo-inositol mannosyltransferase. This family is most closely related to the GT4 family of glycosyltransferases and named after PimA in Propionibacterium freudenreichii, which is involved in the biosynthesis of phosphatidyl-myo-inositol mannosides (PIM) which are early precursors in the biosynthesis of lipomannans (LM) and lipoarabinomannans (LAM), and catalyzes the addition of a mannosyl residue from GDP-D-mannose (GDP-Man) to the position 2 of the carrier lipid phosphatidyl-myo-inositol (PI) to generate a phosphatidyl-myo-inositol bearing an alpha-1,2-linked mannose residue (PIM1). Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea.
cd03794 GT4_WbuB-like 3.10e-13 476 684 93 324
Escherichia coli WbuB and similar proteins. This family is most closely related to the GT1 family of glycosyltransferases. WbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QBF87859.1 0.0 1 1258 1 1266
QFH49844.1 0.0 1 1258 1 1266
QGP83740.1 0.0 1 1258 1 1266
QFH65165.1 0.0 1 1258 1 1266
QIM42798.1 0.0 1 1258 1 1266

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4DSG_A 1.71e-44 790 1248 11 451
CrystalStructure of oxidized UDP-Galactopyranose mutase [Trypanosoma cruzi],4DSG_B Crystal Structure of oxidized UDP-Galactopyranose mutase [Trypanosoma cruzi],4DSH_A Crystal structure of reduced UDP-Galactopyranose mutase [Trypanosoma cruzi],4DSH_B Crystal structure of reduced UDP-Galactopyranose mutase [Trypanosoma cruzi]
3UTE_A 4.31e-43 792 1252 14 479
Crystalstructure of Aspergillus fumigatus UDP galactopyranose mutase sulfate complex [Aspergillus fumigatus],3UTE_B Crystal structure of Aspergillus fumigatus UDP galactopyranose mutase sulfate complex [Aspergillus fumigatus],3UTE_C Crystal structure of Aspergillus fumigatus UDP galactopyranose mutase sulfate complex [Aspergillus fumigatus],3UTE_D Crystal structure of Aspergillus fumigatus UDP galactopyranose mutase sulfate complex [Aspergillus fumigatus],3UTF_A Crystal structure of Aspergillus fumigatus UDP galactopyranose mutase in reduced state [Aspergillus fumigatus],3UTF_B Crystal structure of Aspergillus fumigatus UDP galactopyranose mutase in reduced state [Aspergillus fumigatus],3UTF_C Crystal structure of Aspergillus fumigatus UDP galactopyranose mutase in reduced state [Aspergillus fumigatus],3UTF_D Crystal structure of Aspergillus fumigatus UDP galactopyranose mutase in reduced state [Aspergillus fumigatus],3UTG_A Crystal structure of Aspergillus fumigatus UDP galactopyranose mutase complexed with UDP in reduced state [Aspergillus fumigatus],3UTG_B Crystal structure of Aspergillus fumigatus UDP galactopyranose mutase complexed with UDP in reduced state [Aspergillus fumigatus],3UTG_C Crystal structure of Aspergillus fumigatus UDP galactopyranose mutase complexed with UDP in reduced state [Aspergillus fumigatus],3UTG_D Crystal structure of Aspergillus fumigatus UDP galactopyranose mutase complexed with UDP in reduced state [Aspergillus fumigatus],3UTH_A Crystal structure of Aspergillus fumigatus UDP galactopyranose mutase complexed with substrate UDP-Galp in reduced state [Aspergillus fumigatus],3UTH_B Crystal structure of Aspergillus fumigatus UDP galactopyranose mutase complexed with substrate UDP-Galp in reduced state [Aspergillus fumigatus],3UTH_C Crystal structure of Aspergillus fumigatus UDP galactopyranose mutase complexed with substrate UDP-Galp in reduced state [Aspergillus fumigatus],3UTH_D Crystal structure of Aspergillus fumigatus UDP galactopyranose mutase complexed with substrate UDP-Galp in reduced state [Aspergillus fumigatus],4GDE_A Crystal structure of NADPH-reduced Aspergillus fumigatus UDP-galactopyranose [Aspergillus fumigatus],4GDE_B Crystal structure of NADPH-reduced Aspergillus fumigatus UDP-galactopyranose [Aspergillus fumigatus],4GDE_C Crystal structure of NADPH-reduced Aspergillus fumigatus UDP-galactopyranose [Aspergillus fumigatus],4GDE_D Crystal structure of NADPH-reduced Aspergillus fumigatus UDP-galactopyranose [Aspergillus fumigatus],5VWT_A Crystal structure of oxidized Aspergillus fumigatus UDP-galactopyranose mutase complexed with NADPH [Aspergillus fumigatus],5VWT_B Crystal structure of oxidized Aspergillus fumigatus UDP-galactopyranose mutase complexed with NADPH [Aspergillus fumigatus],5VWT_C Crystal structure of oxidized Aspergillus fumigatus UDP-galactopyranose mutase complexed with NADPH [Aspergillus fumigatus],5VWT_D Crystal structure of oxidized Aspergillus fumigatus UDP-galactopyranose mutase complexed with NADPH [Aspergillus fumigatus],5VWU_A Crystal structure of oxidized Aspergillus fumigatus UDP-galactopyranose mutase complexed with NADH [Aspergillus fumigatus],5VWU_B Crystal structure of oxidized Aspergillus fumigatus UDP-galactopyranose mutase complexed with NADH [Aspergillus fumigatus],5VWU_C Crystal structure of oxidized Aspergillus fumigatus UDP-galactopyranose mutase complexed with NADH [Aspergillus fumigatus],5VWU_D Crystal structure of oxidized Aspergillus fumigatus UDP-galactopyranose mutase complexed with NADH [Aspergillus fumigatus]
4U8K_A 2.58e-42 792 1252 14 479
Structureof Aspergillus fumigatus UDP-Galactopyranose mutase mutant Q107A [Aspergillus fumigatus],4U8K_B Structure of Aspergillus fumigatus UDP-Galactopyranose mutase mutant Q107A [Aspergillus fumigatus],4U8K_C Structure of Aspergillus fumigatus UDP-Galactopyranose mutase mutant Q107A [Aspergillus fumigatus],4U8K_D Structure of Aspergillus fumigatus UDP-Galactopyranose mutase mutant Q107A [Aspergillus fumigatus]
3UKL_A 3.30e-42 792 1252 10 475
Crystalstructure of UDP-galactopyranose mutase from Aspergillus fumigatus in complex with UDP [Aspergillus fumigatus],3UKL_B Crystal structure of UDP-galactopyranose mutase from Aspergillus fumigatus in complex with UDP [Aspergillus fumigatus],3UKL_C Crystal structure of UDP-galactopyranose mutase from Aspergillus fumigatus in complex with UDP [Aspergillus fumigatus],3UKL_D Crystal structure of UDP-galactopyranose mutase from Aspergillus fumigatus in complex with UDP [Aspergillus fumigatus],3UKL_E Crystal structure of UDP-galactopyranose mutase from Aspergillus fumigatus in complex with UDP [Aspergillus fumigatus],3UKL_F Crystal structure of UDP-galactopyranose mutase from Aspergillus fumigatus in complex with UDP [Aspergillus fumigatus],3UKL_G Crystal structure of UDP-galactopyranose mutase from Aspergillus fumigatus in complex with UDP [Aspergillus fumigatus],3UKL_H Crystal structure of UDP-galactopyranose mutase from Aspergillus fumigatus in complex with UDP [Aspergillus fumigatus]
3UKH_A 3.85e-42 792 1252 10 475
Crystalstructure of udp-galactopyranose mutase from Aspergillus fumigatus in complex with UDPGALP (non-reduced) [Aspergillus fumigatus],3UKH_B Crystal structure of udp-galactopyranose mutase from Aspergillus fumigatus in complex with UDPGALP (non-reduced) [Aspergillus fumigatus],3UKH_C Crystal structure of udp-galactopyranose mutase from Aspergillus fumigatus in complex with UDPGALP (non-reduced) [Aspergillus fumigatus],3UKH_D Crystal structure of udp-galactopyranose mutase from Aspergillus fumigatus in complex with UDPGALP (non-reduced) [Aspergillus fumigatus],3UKH_E Crystal structure of udp-galactopyranose mutase from Aspergillus fumigatus in complex with UDPGALP (non-reduced) [Aspergillus fumigatus],3UKH_F Crystal structure of udp-galactopyranose mutase from Aspergillus fumigatus in complex with UDPGALP (non-reduced) [Aspergillus fumigatus],3UKH_G Crystal structure of udp-galactopyranose mutase from Aspergillus fumigatus in complex with UDPGALP (non-reduced) [Aspergillus fumigatus],3UKH_H Crystal structure of udp-galactopyranose mutase from Aspergillus fumigatus in complex with UDPGALP (non-reduced) [Aspergillus fumigatus]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000029 0.000016 0.000001 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001426_04196.