CAZyme Information: MGYG000001430_00913

Basic Information

• Species: Holdemania massiliensis
• Lineage: Bacteria; Firmicutes; Bacilli; Erysipelotrichales; Erysipelotrichaceae; Holdemania; Holdemania massiliensis
• CAZyme ID: MGYG000001430_00913
• CAZy Family: GH3
• CAZyme Description: Beta-hexosaminidase

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
589		63679.48	4.3106

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000001430	3757342	Isolate	not provided	Europe

• Gene Location: Start: 960938; End: 962707 Strand: +

Full Sequence      

MRCSSASSSSFSGRRWSAMILSLFILAGCSNPIPVPTPEAASTPAPSSDSMPDKMSEQQL
KDLVAKMDVQEKVGQLVIVSFETTEVDTKTEAWLRTNKIGNVIVYAKNIENAEQATSLTG
QLQKTIRNATQIPAFIGIDQEGGMVNRVREGVTIFPSPMAIAAGRHENLYSLAWSMADEL
SGMGFNMNFAPVLDVNSNPDNPVIHLRAYGDDPQAAANFASIWIKGLQEGGMVSVAKHFP
GHGDTSEDSHFALPKVNKTLDELKAMELIPFEAAIHSGVSAIMTSHILFPKIEKEKIPAT
LSKTIVTDLLKDELGYNGIVISDSLQMDAIQAHYGMAEAAVKAIQAGVDMLILGDGKVLQ
PDSEDVQTPVIEALIEAVGQGTITAERLDDAVLSILRIKNDYGLFIDQGEQNHAPYDIDL
NAHQVLVQETSDQSMTLIRDDVSALPLPTDSTLFVSFPCVYPLAFDKKSFGEVAADSLFG
KAVNVHQDPTQSEIEDILQKASGYDTIVLLVYNMADSPNQLNLLTQLLETEKPIVVICAG
SPYDLQYLEDAPTVLCTYGYTPSAVLSAISVLNGTLLPEGKLPVEIPEK

Enzyme Prediction     

No EC number prediction in MGYG000001430_00913.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH3	129	352	1.1e-65	0.9675925925925926

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
COG1472	BglX	4.98e-97	67	447	1	350	Periplasmic beta-glucosidase and related glycosidases [Carbohydrate transport and metabolism].
pfam00933	Glyco_hydro_3	1.17e-90	69	398	2	316	Glycosyl hydrolase family 3 N terminal domain.
PRK05337	PRK05337	1.74e-64	78	351	8	277	beta-hexosaminidase; Provisional
PRK15098	PRK15098	1.02e-23	21	487	7	444	beta-glucosidase BglX.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
AAM23516.1	4.02e-132	64	586	4	526
AAQ01678.1	4.02e-132	64	586	4	526
ADH60057.1	4.52e-128	64	586	4	526
ABY91501.1	7.45e-125	67	586	1	520
ADD01527.1	1.37e-123	64	586	3	525

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
6K5J_A	3.88e-100	69	586	13	531	Structureof a glycoside hydrolase family 3 beta-N-acetylglucosaminidase from Paenibacillus sp. str. FPU-7 [Paenibacillaceae]
4ZM6_A	6.01e-82	69	587	9	528	Aunique GCN5-related glucosamine N-acetyltransferase region exist in the fungal multi-domain GH3 beta-N-acetylglucosaminidase [Rhizomucor miehei CAU432],4ZM6_B A unique GCN5-related glucosamine N-acetyltransferase region exist in the fungal multi-domain GH3 beta-N-acetylglucosaminidase [Rhizomucor miehei CAU432]
3BMX_A	1.46e-79	63	587	38	618	Beta-N-hexosaminidase(YbbD) from Bacillus subtilis [Bacillus subtilis],3BMX_B Beta-N-hexosaminidase (YbbD) from Bacillus subtilis [Bacillus subtilis],3NVD_A Structure of YBBD in complex with pugnac [Bacillus subtilis],3NVD_B Structure of YBBD in complex with pugnac [Bacillus subtilis]
3LK6_A	4.34e-79	63	587	12	592	ChainA, Lipoprotein ybbD [Bacillus subtilis],3LK6_B Chain B, Lipoprotein ybbD [Bacillus subtilis],3LK6_C Chain C, Lipoprotein ybbD [Bacillus subtilis],3LK6_D Chain D, Lipoprotein ybbD [Bacillus subtilis]
4GYJ_A	8.83e-79	63	587	42	622	Crystalstructure of mutant (D318N) bacillus subtilis family 3 glycoside hydrolase (nagz) in complex with glcnac-murnac (space group P1) [Bacillus subtilis subsp. subtilis str. 168],4GYJ_B Crystal structure of mutant (D318N) bacillus subtilis family 3 glycoside hydrolase (nagz) in complex with glcnac-murnac (space group P1) [Bacillus subtilis subsp. subtilis str. 168],4GYK_A Crystal structure of mutant (D318N) bacillus subtilis family 3 glycoside hydrolase (nagz) in complex with glcnac-murnac (space group P1211) [Bacillus subtilis subsp. subtilis str. 168],4GYK_B Crystal structure of mutant (D318N) bacillus subtilis family 3 glycoside hydrolase (nagz) in complex with glcnac-murnac (space group P1211) [Bacillus subtilis subsp. subtilis str. 168]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
P40406	7.97e-79	63	587	38	618	Beta-hexosaminidase OS=Bacillus subtilis (strain 168) OX=224308 GN=nagZ PE=1 SV=1
P48823	4.01e-56	99	586	64	596	Beta-hexosaminidase A OS=Pseudoalteromonas piscicida OX=43662 GN=cht60 PE=1 SV=1
B2FPW9	1.70e-48	76	383	1	309	Beta-hexosaminidase OS=Stenotrophomonas maltophilia (strain K279a) OX=522373 GN=nagZ PE=3 SV=1
B4SRK3	8.78e-48	76	383	1	309	Beta-hexosaminidase OS=Stenotrophomonas maltophilia (strain R551-3) OX=391008 GN=nagZ PE=3 SV=1
Q0A911	1.65e-45	77	353	6	282	Beta-hexosaminidase OS=Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1) OX=187272 GN=nagZ PE=3 SV=1

SignalP and Lipop Annotations

This protein is predicted as LIPO

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000007	0.000527	0.999516	0.000003	0.000001	0.000000

TMHMM  Annotations     

There is no transmembrane helices in MGYG000001430_00913.