You are browsing environment: HUMAN GUT
CAZyme Information: MGYG000001434_01169
You are here: Home > Sequence: MGYG000001434_01169
Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Butyricicoccus pullicaecorum | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Butyricicoccaceae; Butyricicoccus; Butyricicoccus pullicaecorum | |||||||||||
| CAZyme ID | MGYG000001434_01169 | |||||||||||
| CAZy Family | GH39 | |||||||||||
| CAZyme Description | HTH-type transcriptional activator RhaS | |||||||||||
| CAZyme Property |
|
|||||||||||
| Genome Property |
|
|||||||||||
| Gene Location | Start: 1189255; End: 1191648 Strand: - | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH39 | 306 | 678 | 1.8e-53 | 0.8654292343387471 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| pfam01229 | Glyco_hydro_39 | 9.01e-30 | 305 | 654 | 11 | 355 | Glycosyl hydrolases family 39. |
| COG2207 | AraC | 1.62e-29 | 157 | 261 | 21 | 125 | AraC-type DNA-binding domain and AraC-containing proteins [Transcription]. |
| smart00342 | HTH_ARAC | 9.79e-29 | 172 | 255 | 1 | 84 | helix_turn_helix, arabinose operon control protein. |
| pfam12833 | HTH_18 | 1.87e-27 | 178 | 257 | 1 | 81 | Helix-turn-helix domain. |
| COG3664 | XynB | 8.84e-22 | 324 | 794 | 1 | 426 | Beta-xylosidase [Carbohydrate transport and metabolism]. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QQQ92191.1 | 1.33e-267 | 10 | 795 | 10 | 799 |
| QJU15301.1 | 1.33e-267 | 10 | 795 | 10 | 799 |
| ASU27451.1 | 1.52e-267 | 10 | 795 | 14 | 803 |
| ANU74646.2 | 1.52e-267 | 10 | 795 | 14 | 803 |
| QGH26007.1 | 2.33e-209 | 4 | 795 | 8 | 801 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 4M29_A | 6.02e-32 | 291 | 792 | 6 | 496 | Structureof a GH39 Beta-xylosidase from Caulobacter crescentus [Caulobacter vibrioides CB15] |
| 6YYH_A | 7.94e-32 | 312 | 797 | 41 | 507 | Crystalstructure of beta-D-xylosidase from Dictyoglomus thermophilum in ligand-free form [Dictyoglomus thermophilum H-6-12],6YYH_B Crystal structure of beta-D-xylosidase from Dictyoglomus thermophilum in ligand-free form [Dictyoglomus thermophilum H-6-12],6YYI_A Crystal structure of beta-D-xylosidase from Dictyoglomus thermophilum bound to beta-D-xylopyranose [Dictyoglomus thermophilum H-6-12],6YYI_B Crystal structure of beta-D-xylosidase from Dictyoglomus thermophilum bound to beta-D-xylopyranose [Dictyoglomus thermophilum H-6-12] |
| 4EKJ_A | 8.08e-32 | 291 | 792 | 6 | 496 | ChainA, Beta-xylosidase [Caulobacter vibrioides] |
| 1PX8_A | 2.13e-29 | 295 | 797 | 1 | 484 | Crystalstructure of beta-D-xylosidase from Thermoanaerobacterium saccharolyticum, a family 39 glycoside hydrolase [Thermoanaerobacterium saccharolyticum],1PX8_B Crystal structure of beta-D-xylosidase from Thermoanaerobacterium saccharolyticum, a family 39 glycoside hydrolase [Thermoanaerobacterium saccharolyticum],1UHV_A Crystal structure of beta-D-xylosidase from Thermoanaerobacterium saccharolyticum, a family 39 glycoside hydrolase [Thermoanaerobacterium saccharolyticum],1UHV_B Crystal structure of beta-D-xylosidase from Thermoanaerobacterium saccharolyticum, a family 39 glycoside hydrolase [Thermoanaerobacterium saccharolyticum],1UHV_C Crystal structure of beta-D-xylosidase from Thermoanaerobacterium saccharolyticum, a family 39 glycoside hydrolase [Thermoanaerobacterium saccharolyticum],1UHV_D Crystal structure of beta-D-xylosidase from Thermoanaerobacterium saccharolyticum, a family 39 glycoside hydrolase [Thermoanaerobacterium saccharolyticum] |
| 3OOU_A | 1.41e-14 | 158 | 256 | 7 | 105 | Thestructure of a protein with unkown function from Listeria innocua [Listeria innocua] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| O30360 | 3.76e-28 | 306 | 797 | 12 | 484 | Beta-xylosidase OS=Thermoanaerobacterium saccharolyticum (strain DSM 8691 / JW/SL-YS485) OX=1094508 GN=xynB PE=3 SV=1 |
| P36906 | 5.03e-28 | 295 | 797 | 1 | 484 | Beta-xylosidase OS=Thermoanaerobacterium saccharolyticum OX=28896 GN=xynB PE=1 SV=1 |
| P23552 | 1.57e-23 | 309 | 655 | 21 | 362 | Beta-xylosidase OS=Caldicellulosiruptor saccharolyticus OX=44001 GN=xynB PE=3 SV=1 |
| Q6GD21 | 8.82e-23 | 10 | 794 | 8 | 741 | Uncharacterized HTH-type transcriptional regulator SAS0078 OS=Staphylococcus aureus (strain MSSA476) OX=282459 GN=SAS0078 PE=4 SV=1 |
| Q8NYT6 | 8.82e-23 | 10 | 794 | 8 | 741 | Uncharacterized HTH-type transcriptional regulator MW0077 OS=Staphylococcus aureus (strain MW2) OX=196620 GN=MW0077 PE=4 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 1.000046 | 0.000000 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |