CAZyme Information: MGYG000001436_04668

Basic Information

• Species: Paenibacillus_F sp000411255
• Lineage: Bacteria; Firmicutes; Bacilli; Paenibacillales; Paenibacillaceae; Paenibacillus_F; Paenibacillus_F sp000411255
• CAZyme ID: MGYG000001436_04668
• CAZy Family: PL15
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
767	MGYG000001436_2|CGC25	88336.1	6.088

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000001436	6290841	Isolate	not provided	not provided

• Gene Location: Start: 1873852; End: 1876155 Strand: +

Full Sequence      

MSKSLYQPRSGVLTIQYEPDAQTKVIENPPRFTWIPARLEKDCYVLEISERDDFPSGLSR
TYAPVPYNFFTPEKTFAPGTYYWRYALYENDKRTSEWSVARSFSVPENLPETPLLAKGER
FKESGCARPRLWLQGEEGIARYREKIAADPEGTGWKLFYELSVLPWAEREPHEEPEPYPG
NKRTVELWRQSYIACQEMLYAIRHLSIAGKVLDDSRLLGRAKAWLLAAASWDPEGPTGRD
YNDEAAFRMAGALAWGYDWLHGELDAEERERVKRSLAARTRQVAVHAIRRSKIHQVPYDS
HAVRSLSSVLTPCCISLLHEEPEAEEWLHYTLEYFWTLYTPWGGEDGGWAEGPHYWTTGM
AALLEAIEWIRGYTRLNLFDRPFFRKTGDFPLYVYNPNASTRTTFGDNSSLGGKFGVKTG
YNMRHLAGVTGNGRYQWYYERIKEMDPEAAKQFHNHGWWDFRFDELVYRQAYPQIQAEAP
SDTEELKWFRDVGWVAMHHRMDDQGEQIMLLTKASKYGSVSHSHADQGAFYIHAFGEALA
VETGYYVAFNSTMHRNWRRQTVSKNSLLIDGAGQYAGTDKSLNMAASGTVAEAKRDKNAS
YVKMDVTAAYLEQVPYAKRVEREIYFVDNSYFVVVDSVDLNCPGRIEWLYHALYEMDLQE
QSFRVTGKTASLEGRFVFCSSGELTLSQSNEFSGVDEKEIEGLSRQWHLKAESFPAASHR
LVTLLVPKKPGEEDRYVSYFMDDQGFVFSLYFTDNGKTRKIDVQKAF

Enzyme Prediction     

EC	4.2.2.-

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
PL15	500	638	4.4e-64	0.9928057553956835

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam07940	Hepar_II_III	7.12e-21	483	651	3	163	Heparinase II/III-like protein. This family features sequences that are similar to a region of the Flavobacterium heparinum proteins heparinase II and heparinase III. The former is known to degrade heparin and heparin sulphate, whereas the latter predominantly degrades heparin sulphate. Both are secreted into the periplasmic space upon induction with heparin.
pfam16332	DUF4962	1.75e-19	24	463	18	469	Domain of unknown function (DUF4962). This family consists of uncharacterized proteins around 870 residues in length and is mainly found in various Bacteroides species. The function of this protein is unknown.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QAV18419.1	0.0	1	767	1	767
AZS17077.1	0.0	2	767	4	768
AWV32994.1	0.0	1	767	1	764
AIQ73651.1	0.0	1	767	1	764
ASA21545.1	0.0	1	767	1	764

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
3A0O_A	3.67e-262	5	767	14	776	Crystalstructure of alginate lyase from Agrobacterium tumefaciens C58 [Agrobacterium fabrum str. C58],3A0O_B Crystal structure of alginate lyase from Agrobacterium tumefaciens C58 [Agrobacterium fabrum str. C58]
3AFL_A	1.19e-260	5	767	14	776	Crystalstructure of exotype alginate lyase Atu3025 H531A complexed with alginate trisaccharide [Agrobacterium fabrum str. C58]
6LJA_A	1.74e-26	14	715	32	774	ChainA, Heparinase II/III-like protein [Bacteroides intestinalis DSM 17393]
6LJL_A	3.41e-24	14	715	32	774	ChainA, Heparinase II/III-like protein [Bacteroides intestinalis DSM 17393]

Swiss-Prot Hits     

has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
1.000068	0.000004	0.000000	0.000000	0.000000	0.000000

TMHMM  Annotations     

There is no transmembrane helices in MGYG000001436_04668.