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CAZyme Information: MGYG000001446_00118

You are here: Home > Sequence: MGYG000001446_00118

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Cutibacterium avidum
Lineage Bacteria; Actinobacteriota; Actinomycetia; Propionibacteriales; Propionibacteriaceae; Cutibacterium; Cutibacterium avidum
CAZyme ID MGYG000001446_00118
CAZy Family CBM5
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
880 MGYG000001446_1|CGC2 91613.91 5.4152
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001446 2726478 Isolate not provided not provided
Gene Location Start: 127438;  End: 130080  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001446_00118.

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
NF033681 ExeM_NucH_DNase 0.0 242 802 7 545
ExeM/NucH family extracellular endonuclease.
COG2374 COG2374 1.11e-156 34 804 22 790
Predicted extracellular nuclease [General function prediction only].
NF033680 exonuc_ExeM-GG 4.97e-59 34 804 22 847
extracellular exonuclease ExeM. ExeM, as described in Shewanella oneidensis, is a biofilm formation-associated exonuclease that cleaves extracellular DNA (eDNA), a biofilm component. Members of the ExeM family contain two or three pairs of Cys residues, presumed to form disulfide bonds, and a C-terminal GlyGly-CTERM membrane-anchoring segment. Strangely, engineered removal of the GlyGly-CTERM region did not result in net export from the cell and appearance of the enzyme in culture supernatants.
cd10283 MnuA_DNase1-like 6.43e-56 481 800 1 266
Mycoplasma pulmonis MnuA nuclease-like. This subfamily includes Mycoplasma pulmonis MnuA, a membrane-associated nuclease related to Deoxyribonuclease 1 (DNase1 or DNase I, EC 3.1.21.1). The in vivo role of MnuA is as yet undetermined. This subfamily belongs to the large EEP (exonuclease/endonuclease/phosphatase) superfamily that contains functionally diverse enzymes that share a common catalytic mechanism of cleaving phosphodiester bonds.
cd04486 YhcR_OBF_like 2.02e-15 241 311 8 73
YhcR_OBF_like: A subfamily of OB-fold domains similar to the OB folds of Bacillus subtilis YhcR. YhcR is a sugar-nonspecific nuclease, which is active in the presence of Ca2+ and Mn2+. It cleaves RNA endonucleolytically, producing 3'-monophosphate nucleosides. YhcR appears to be the major Ca2+ activated nuclease of B. subtilis. YhcR may be localized in the cell wall.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ANC31565.1 7.81e-197 27 808 32 845
QAY71724.1 8.66e-185 38 808 40 846
ACZ32093.1 7.30e-184 1 801 1 829
QAY64865.1 5.16e-180 27 801 32 846
QAY59561.1 1.30e-179 4 806 1 932

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.001069 0.894715 0.000482 0.103055 0.000413 0.000245

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001446_00118.