dbCAN-seq: a database of CAZyme sequence and annotation

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CAZyme Information: MGYG000001446_00770

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Basic Information help

Species

Cutibacterium avidum

Lineage

Bacteria; Actinobacteriota; Actinomycetia; Propionibacteriales; Propionibacteriaceae; Cutibacterium; Cutibacterium avidum

CAZyme ID

MGYG000001446_00770

CAZy Family

GH5

CAZyme Description

hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
500	MGYG000001446_1\|CGC7	53878.17	6.7544

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000001446	2726478	Isolate	not provided	not provided

Gene Location

Start: 845952; End: 847454 Strand: +

Full Sequence Download help

Enzyme Prediction help

No EC number prediction in MGYG000001446_00770.

CAZyme Signature Domains help

Family	Start	End	Evalue	family coverage
GH5	63	370	4.9e-52	0.9907407407407407

CDD Domains download full data without filtering help

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam18564	Glyco_hydro_5_C	1.21e-12	410	498	2	85	Glycoside hydrolase family 5 C-terminal domain. This is the C-terminal domain of endo-glycoceramidase II (EGC), a membrane-associated family 5 glycosidase pfam00150. The C-terminal domain assumes a beta-sandwich fold, which resembles that of many carbohydrate-binding modules.
pfam00150	Cellulase	8.02e-10	83	374	27	272	Cellulase (glycosyl hydrolase family 5).

CAZyme Hits help

Hit ID	Query Start	Query End	Hit Start	Hit End
AGJ76747.1	1	500	1	500
QQY13432.1	1	500	1	500
QRH09830.1	1	500	1	500
AEH30408.1	1	500	1	500
AAT83813.1	1	500	1	500

PDB Hits download full data without filtering help

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
5CCU_A	6.38e-49	49	495	48	474	ChainA, Putative secreted endoglycosylceramidase [Rhodococcus hoagii 103S],5CCU_B Chain B, Putative secreted endoglycosylceramidase [Rhodococcus hoagii 103S]
5J14_A	3.27e-48	49	495	48	474	ChainA, Putative secreted endoglycosylceramidase [Rhodococcus hoagii 103S],5J14_B Chain B, Putative secreted endoglycosylceramidase [Rhodococcus hoagii 103S],5J7Z_A Chain A, Putative secreted endoglycosylceramidase [Rhodococcus hoagii 103S],5J7Z_B Chain B, Putative secreted endoglycosylceramidase [Rhodococcus hoagii 103S]
2OSW_A	2.18e-28	54	496	39	478	Endo-glycoceramidaseII from Rhodococcus sp. [Rhodococcus sp.],2OSW_B Endo-glycoceramidase II from Rhodococcus sp. [Rhodococcus sp.],2OYK_A Endo-glycoceramidase II from Rhodococcus sp.: cellobiose-like isofagomine complex [Rhodococcus sp.],2OYK_B Endo-glycoceramidase II from Rhodococcus sp.: cellobiose-like isofagomine complex [Rhodococcus sp.],2OYL_A Endo-glycoceramidase II from Rhodococcus sp.: cellobiose-like imidazole complex [Rhodococcus sp.],2OYL_B Endo-glycoceramidase II from Rhodococcus sp.: cellobiose-like imidazole complex [Rhodococcus sp.],2OYM_A Endo-glycoceramidase II from Rhodococcus sp.: five-membered iminocyclitol complex [Rhodococcus sp.],2OYM_B Endo-glycoceramidase II from Rhodococcus sp.: five-membered iminocyclitol complex [Rhodococcus sp.]
2OSX_A	9.93e-28	54	496	39	478	ChainA, Endoglycoceramidase II [Rhodococcus sp.]
2OSY_A	1.34e-27	54	496	39	478	ChainA, Endoglycoceramidase II [Rhodococcus sp.],2OSY_B Chain B, Endoglycoceramidase II [Rhodococcus sp.]

Swiss-Prot Hits download full data without filtering help

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
A0A3S5YBC7	3.01e-48	49	495	40	466	Endoglycoceramidase I OS=Rhodococcus hoagii (strain 103S) OX=685727 GN=REQ_38260 PE=1 SV=1
Q9GV16	7.95e-28	37	275	23	285	Endoglycoceramidase OS=Cyanea nozakii OX=135523 PE=1 SV=1
Q6L6S1	8.95e-28	52	435	32	422	Endoglycoceramidase OS=Hydra vulgaris OX=6087 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000407	0.998651	0.000201	0.000317	0.000203	0.000172

TMHMM Annotations download full data without filtering help

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