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CAZyme Information: MGYG000001450_02373
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Nesterenkonia massiliensis | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Actinobacteriota; Actinomycetia; Actinomycetales; Micrococcaceae; Nesterenkonia; Nesterenkonia massiliensis | |||||||||||
| CAZyme ID | MGYG000001450_02373 | |||||||||||
| CAZy Family | AA3 | |||||||||||
| CAZyme Description | Choline oxidase | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 63236; End: 64828 Strand: + | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| AA3 | 4 | 530 | 1.5e-151 | 0.9982394366197183 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| PRK02106 | PRK02106 | 9.51e-134 | 1 | 528 | 1 | 532 | choline dehydrogenase; Validated |
| COG2303 | BetA | 6.63e-121 | 23 | 530 | 25 | 536 | Choline dehydrogenase or related flavoprotein [Lipid transport and metabolism, General function prediction only]. |
| pfam05199 | GMC_oxred_C | 1.46e-44 | 384 | 523 | 2 | 143 | GMC oxidoreductase. This domain found associated with pfam00732. |
| pfam00732 | GMC_oxred_N | 3.64e-31 | 80 | 307 | 22 | 218 | GMC oxidoreductase. This family of proteins bind FAD as a cofactor. |
| PLN02785 | PLN02785 | 2.79e-29 | 212 | 520 | 231 | 569 | Protein HOTHEAD |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QLI67559.1 | 1.10e-140 | 2 | 530 | 10 | 532 |
| ATY64015.1 | 1.16e-137 | 5 | 527 | 13 | 530 |
| QUC21054.1 | 9.25e-137 | 3 | 530 | 11 | 533 |
| QPH10566.1 | 5.23e-136 | 3 | 530 | 11 | 533 |
| BCS15458.1 | 6.73e-136 | 4 | 527 | 13 | 529 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 2JBV_A | 1.65e-290 | 1 | 529 | 9 | 528 | Crystalstructure of choline oxidase reveals insights into the catalytic mechanism [Arthrobacter globiformis],2JBV_B Crystal structure of choline oxidase reveals insights into the catalytic mechanism [Arthrobacter globiformis],4MJW_A Crystal Structure of Choline Oxidase in Complex with the Reaction Product Glycine Betaine [Arthrobacter globiformis],4MJW_B Crystal Structure of Choline Oxidase in Complex with the Reaction Product Glycine Betaine [Arthrobacter globiformis] |
| 3NNE_A | 4.72e-290 | 1 | 529 | 9 | 528 | Crystalstructure of choline oxidase S101A mutant [Arthrobacter globiformis],3NNE_B Crystal structure of choline oxidase S101A mutant [Arthrobacter globiformis],3NNE_C Crystal structure of choline oxidase S101A mutant [Arthrobacter globiformis],3NNE_D Crystal structure of choline oxidase S101A mutant [Arthrobacter globiformis],3NNE_E Crystal structure of choline oxidase S101A mutant [Arthrobacter globiformis],3NNE_F Crystal structure of choline oxidase S101A mutant [Arthrobacter globiformis],3NNE_G Crystal structure of choline oxidase S101A mutant [Arthrobacter globiformis],3NNE_H Crystal structure of choline oxidase S101A mutant [Arthrobacter globiformis] |
| 3LJP_A | 6.70e-290 | 1 | 529 | 9 | 528 | ChainA, Choline oxidase [Arthrobacter globiformis],3LJP_B Chain B, Choline oxidase [Arthrobacter globiformis] |
| 6ZH7_A | 3.65e-66 | 4 | 527 | 6 | 560 | ChainA, Fatty acid photodecarboxylase, chloroplastic [Chlorella variabilis],6ZH7_B Chain B, Fatty acid photodecarboxylase, chloroplastic [Chlorella variabilis] |
| 6YRU_AAA | 3.65e-66 | 4 | 527 | 6 | 560 | ChainAAA, Fatty acid Photodecarboxylase [Chlorella variabilis],6YRV_AAA Chain AAA, Fatty acid Photodecarboxylase [Chlorella variabilis],6YRX_AAA Chain AAA, Fatty acid Photodecarboxylase [Chlorella variabilis],6YRZ_AAA Chain AAA, Fatty acid photodecarboxylase, chloroplastic [Chlorella variabilis] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| Q7X2H8 | 9.03e-290 | 1 | 529 | 9 | 528 | Choline oxidase OS=Arthrobacter globiformis OX=1665 GN=codA PE=1 SV=1 |
| Q47944 | 5.40e-95 | 6 | 530 | 5 | 530 | L-sorbose 1-dehydrogenase OS=Gluconobacter oxydans OX=442 PE=3 SV=1 |
| A6U6Y8 | 1.25e-90 | 7 | 527 | 4 | 525 | Oxygen-dependent choline dehydrogenase OS=Sinorhizobium medicae (strain WSM419) OX=366394 GN=betA PE=3 SV=1 |
| B9JBA2 | 1.76e-90 | 7 | 527 | 4 | 525 | Oxygen-dependent choline dehydrogenase OS=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) OX=311403 GN=betA PE=3 SV=1 |
| C3MIE4 | 2.47e-90 | 7 | 527 | 4 | 525 | Oxygen-dependent choline dehydrogenase OS=Sinorhizobium fredii (strain NBRC 101917 / NGR234) OX=394 GN=betA PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 1.000056 | 0.000002 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |