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CAZyme Information: MGYG000001450_02528

You are here: Home > Sequence: MGYG000001450_02528

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Nesterenkonia massiliensis
Lineage Bacteria; Actinobacteriota; Actinomycetia; Actinomycetales; Micrococcaceae; Nesterenkonia; Nesterenkonia massiliensis
CAZyme ID MGYG000001450_02528
CAZy Family GH23
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
258 MGYG000001450_14|CGC1 27206.8 3.8704
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001450 2641047 Isolate not provided Europe
Gene Location Start: 8714;  End: 9490  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001450_02528.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH23 111 250 2.5e-21 0.8

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG2951 MltB 2.59e-31 83 252 105 276
Membrane-bound lytic murein transglycosylase B [Cell wall/membrane/envelope biogenesis].
cd13399 Slt35-like 3.07e-23 108 244 1 102
Slt35-like lytic transglycosylase. Lytic transglycosylase similar to Escherichia coli lytic transglycosylase Slt35 and Pseudomonas aeruginosa Sltb1. Lytic transglycosylase (LT) catalyzes the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid (MurNAc) and N-acetyl-D-glucosamine (GlcNAc) as do "goose-type" lysozymes. However, in addition to this, they also make a new glycosidic bond with the C6 hydroxyl group of the same muramic acid residue. Proteins similar to this this family include the soluble and insoluble membrane-bound LTs in bacteria, the LTs in bacteriophage lambda, as well as the eukaryotic "goose-type" lysozymes (goose egg-white lysozyme; GEWL).
pfam13406 SLT_2 6.48e-07 174 231 155 211
Transglycosylase SLT domain. This family is related to the SLT domain pfam01464.
cd16894 MltD-like 0.002 173 235 29 87
Membrane-bound lytic murein transglycosylase D and similar proteins. Lytic transglycosylases (LT) catalyze the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid (MurNAc) and N-acetyl-D-glucosamine (GlcNAc). Membrane-bound lytic murein transglycosylase D protein (MltD) family members may have one or more small LysM domains, which may contribute to peptidoglycan binding. Unlike the similar "goose-type" lysozymes, LTs also make a new glycosidic bond with the C6 hydroxyl group of the same muramic acid residue. Proteins similar to this family include the soluble and insoluble membrane-bound LTs in bacteria, the LTs in bacteriophage lambda, as well as the eukaryotic "goose-type" lysozymes (goose egg-white lysozyme; GEWL).
pfam01464 SLT 0.004 174 235 35 93
Transglycosylase SLT domain. This family is distantly related to pfam00062. Members are found in phages, type II, type III and type IV secretion systems.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QEE62342.1 1.24e-69 30 254 37 256
ALJ19803.1 9.21e-68 62 254 61 252
AOS61582.1 1.18e-67 37 257 63 293
AOW94284.1 1.31e-67 56 251 42 236
QXV58490.1 1.29e-66 76 256 111 291

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.284315 0.707457 0.006646 0.000560 0.000407 0.000594

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001450_02528.