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CAZyme Information: MGYG000001455.1_01012
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Faecalitalea cylindroides | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes; Bacilli; Erysipelotrichales; Erysipelotrichaceae; Faecalitalea; Faecalitalea cylindroides | |||||||||||
| CAZyme ID | MGYG000001455.1_01012 | |||||||||||
| CAZy Family | GH23 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 34830; End: 41930 Strand: + | |||||||||||
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| COG4646 | COG4646 | 2.86e-68 | 1345 | 1895 | 2 | 585 | Adenine-specific DNA methylase, N12 class [Replication, recombination and repair]. |
| COG4646 | COG4646 | 1.18e-32 | 2013 | 2204 | 439 | 637 | Adenine-specific DNA methylase, N12 class [Replication, recombination and repair]. |
| pfam04851 | ResIII | 1.20e-08 | 1815 | 1904 | 1 | 100 | Type III restriction enzyme, res subunit. |
| smart00487 | DEXDc | 3.73e-08 | 1818 | 1919 | 9 | 110 | DEAD-like helicases superfamily. |
| cd18011 | DEXDc_RapA | 1.16e-07 | 1818 | 2066 | 1 | 173 | DEXH-box helicase domain of RapA. In bacteria, RapA is an RNA polymerase (RNAP)-associated SWI2/SNF2 (switch/sucrose non-fermentable) protein that mediates RNAP recycling during transcription. The ATPase activity of RapA is stimulated by its interaction with RNAP and inhibited by its N-terminal domain. The conformational changes of RapA and its interaction with RNAP are essential for RNAP recycling. RapA is part of the DEAD-like helicase superfamily, a diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| ASV45029.1 | 3.96e-295 | 1048 | 2348 | 1548 | 2917 |
| QIW86704.1 | 1.81e-292 | 1048 | 2348 | 1616 | 2985 |
| QIW86628.1 | 1.81e-292 | 1048 | 2348 | 1616 | 2985 |
| AEY69616.1 | 7.04e-285 | 1055 | 2348 | 1696 | 3061 |
| AXF51455.1 | 1.52e-283 | 1055 | 2348 | 1789 | 3154 |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| Q71TF8 | 1.81e-41 | 1056 | 2177 | 40 | 1230 | Defense against restriction protein B OS=Escherichia phage P1 OX=2886926 GN=darB PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 1.000058 | 0.000000 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |