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CAZyme Information: MGYG000001457_03987

You are here: Home > Sequence: MGYG000001457_03987

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Pseudomonas_B luteola
Lineage Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas_B; Pseudomonas_B luteola
CAZyme ID MGYG000001457_03987
CAZy Family GH1
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
378 MGYG000001457_1|CGC40 43005.61 5.3203
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001457 5659210 Isolate not provided not provided
Gene Location Start: 4214932;  End: 4216068  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001457_03987.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH1 35 343 1.6e-27 0.8088578088578089

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG4124 ManB2 5.54e-04 230 334 242 323
Beta-mannanase [Carbohydrate transport and metabolism].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QEU28973.1 4.20e-289 1 378 1 378
AYN94503.1 2.43e-288 1 378 1 378
QCO19103.1 4.08e-189 1 372 1 372
CCD03548.1 1.14e-187 1 372 1 372
AWJ94494.1 1.14e-187 1 372 1 372

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000058 0.000001 0.000001 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001457_03987.