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CAZyme Information: MGYG000001457_04259
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Pseudomonas_B luteola | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas_B; Pseudomonas_B luteola | |||||||||||
| CAZyme ID | MGYG000001457_04259 | |||||||||||
| CAZy Family | CE8 | |||||||||||
| CAZyme Description | Pectinesterase A | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 232685; End: 233791 Strand: - | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| CE8 | 38 | 355 | 2.5e-80 | 0.9583333333333334 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| COG4677 | PemB | 4.66e-90 | 27 | 361 | 78 | 405 | Pectin methylesterase and related acyl-CoA thioesterases [Carbohydrate transport and metabolism, Lipid transport and metabolism]. |
| pfam01095 | Pectinesterase | 4.43e-49 | 42 | 353 | 11 | 290 | Pectinesterase. |
| PLN02682 | PLN02682 | 4.08e-39 | 30 | 360 | 69 | 362 | pectinesterase family protein |
| PRK10531 | PRK10531 | 1.53e-33 | 33 | 335 | 83 | 422 | putative acyl-CoA thioester hydrolase. |
| PLN02990 | PLN02990 | 8.63e-33 | 43 | 366 | 271 | 553 | Probable pectinesterase/pectinesterase inhibitor |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QEU27378.1 | 2.73e-264 | 1 | 368 | 1 | 368 |
| AYN96395.1 | 1.11e-263 | 1 | 368 | 1 | 368 |
| ALG43734.1 | 1.63e-171 | 5 | 361 | 4 | 358 |
| AKF39689.1 | 1.63e-171 | 5 | 361 | 4 | 358 |
| CCQ42092.1 | 1.63e-171 | 5 | 361 | 4 | 358 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 3UW0_A | 7.70e-172 | 5 | 361 | 7 | 361 | Pectinmethylesterase from Yersinia enterocolitica [Yersinia enterocolitica subsp. enterocolitica 8081] |
| 2NSP_A | 1.68e-124 | 27 | 363 | 1 | 339 | ChainA, Pectinesterase A [Dickeya dadantii 3937],2NSP_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NST_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NST_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NT6_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NT6_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NT9_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NT9_B Chain B, Pectinesterase A [Dickeya dadantii 3937] |
| 1QJV_A | 8.36e-120 | 27 | 363 | 1 | 339 | ChainA, PECTIN METHYLESTERASE [Dickeya chrysanthemi],1QJV_B Chain B, PECTIN METHYLESTERASE [Dickeya chrysanthemi] |
| 2NTB_A | 3.37e-119 | 27 | 363 | 1 | 339 | Crystalstructure of pectin methylesterase in complex with hexasaccharide V [Dickeya dadantii 3937],2NTB_B Crystal structure of pectin methylesterase in complex with hexasaccharide V [Dickeya dadantii 3937],2NTP_A Crystal structure of pectin methylesterase in complex with hexasaccharide VI [Dickeya dadantii 3937],2NTP_B Crystal structure of pectin methylesterase in complex with hexasaccharide VI [Dickeya dadantii 3937],2NTQ_A Crystal structure of pectin methylesterase in complex with hexasaccharide VII [Dickeya dadantii 3937],2NTQ_B Crystal structure of pectin methylesterase in complex with hexasaccharide VII [Dickeya dadantii 3937] |
| 5C1E_A | 2.21e-19 | 42 | 361 | 18 | 294 | CrystalStructure of the Pectin Methylesterase from Aspergillus niger in Penultimately Deglycosylated Form (N-acetylglucosamine Stub at Asn84) [Aspergillus niger ATCC 1015] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| P0C1A8 | 8.90e-120 | 7 | 363 | 5 | 363 | Pectinesterase A OS=Dickeya chrysanthemi OX=556 GN=pemA PE=1 SV=1 |
| P0C1A9 | 5.08e-119 | 7 | 363 | 5 | 363 | Pectinesterase A OS=Dickeya dadantii (strain 3937) OX=198628 GN=pemA PE=1 SV=1 |
| Q43043 | 9.15e-25 | 43 | 353 | 69 | 348 | Pectinesterase OS=Petunia integrifolia OX=4103 GN=PPE1 PE=2 SV=1 |
| Q8VYZ3 | 1.03e-24 | 30 | 360 | 83 | 376 | Probable pectinesterase 53 OS=Arabidopsis thaliana OX=3702 GN=PME53 PE=2 SV=1 |
| Q4PT34 | 3.03e-24 | 43 | 302 | 56 | 286 | Probable pectinesterase 56 OS=Arabidopsis thaliana OX=3702 GN=PME56 PE=2 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.000374 | 0.998055 | 0.000965 | 0.000219 | 0.000187 | 0.000170 |