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CAZyme Information: MGYG000001459_01817
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Fusobacterium nucleatum | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Fusobacteriota; Fusobacteriia; Fusobacteriales; Fusobacteriaceae; Fusobacterium; Fusobacterium nucleatum | |||||||||||
| CAZyme ID | MGYG000001459_01817 | |||||||||||
| CAZy Family | GH23 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 2667; End: 8777 Strand: - | |||||||||||
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| COG4646 | COG4646 | 3.32e-54 | 737 | 1277 | 2 | 540 | Adenine-specific DNA methylase, N12 class [Replication, recombination and repair]. |
| COG4646 | COG4646 | 1.92e-27 | 1420 | 1608 | 441 | 636 | Adenine-specific DNA methylase, N12 class [Replication, recombination and repair]. |
| smart00490 | HELICc | 5.79e-09 | 1659 | 1745 | 1 | 82 | helicase superfamily c-terminal domain. |
| smart00487 | DEXDc | 2.21e-08 | 1221 | 1324 | 7 | 110 | DEAD-like helicases superfamily. |
| cd18011 | DEXDc_RapA | 6.09e-07 | 1223 | 1281 | 1 | 61 | DEXH-box helicase domain of RapA. In bacteria, RapA is an RNA polymerase (RNAP)-associated SWI2/SNF2 (switch/sucrose non-fermentable) protein that mediates RNAP recycling during transcription. The ATPase activity of RapA is stimulated by its interaction with RNAP and inhibited by its N-terminal domain. The conformational changes of RapA and its interaction with RNAP are essential for RNAP recycling. RapA is part of the DEAD-like helicase superfamily, a diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QIW86704.1 | 5.94e-287 | 474 | 2005 | 1652 | 3263 |
| QIW86628.1 | 5.94e-287 | 474 | 2005 | 1652 | 3263 |
| ASV45029.1 | 4.85e-285 | 474 | 1967 | 1584 | 3144 |
| AXF51455.1 | 2.72e-273 | 474 | 1923 | 1818 | 3336 |
| AEY69616.1 | 2.43e-271 | 474 | 1923 | 1725 | 3243 |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| Q71TF8 | 3.26e-30 | 523 | 1783 | 84 | 1555 | Defense against restriction protein B OS=Escherichia phage P1 OX=2886926 GN=darB PE=3 SV=1 |
| P52284 | 3.13e-06 | 530 | 623 | 26 | 115 | Type II methyltransferase M.CvrRI OS=Paramecium bursaria Chlorella virus XZ-6E OX=36360 GN=CVIRIM PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 1.000041 | 0.000000 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |