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CAZyme Information: MGYG000001460_00597
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Romboutsia dakarensis | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes_A; Clostridia; Peptostreptococcales; Peptostreptococcaceae; Romboutsia; Romboutsia dakarensis | |||||||||||
| CAZyme ID | MGYG000001460_00597 | |||||||||||
| CAZy Family | GH73 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 22357; End: 24561 Strand: + | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH73 | 577 | 714 | 1.6e-24 | 0.9609375 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| COG4193 | LytD | 4.55e-50 | 503 | 733 | 32 | 245 | Beta- N-acetylglucosaminidase [Carbohydrate transport and metabolism]. |
| smart00047 | LYZ2 | 3.05e-19 | 565 | 719 | 3 | 145 | Lysozyme subfamily 2. Eubacterial enzymes distantly related to eukaryotic lysozymes. |
| COG3103 | YgiM | 5.69e-17 | 2 | 153 | 1 | 149 | Uncharacterized conserved protein YgiM, contains N-terminal SH3 domain, DUF1202 family [General function prediction only]. |
| COG3103 | YgiM | 2.90e-15 | 317 | 459 | 17 | 149 | Uncharacterized conserved protein YgiM, contains N-terminal SH3 domain, DUF1202 family [General function prediction only]. |
| COG3103 | YgiM | 6.59e-14 | 168 | 303 | 28 | 149 | Uncharacterized conserved protein YgiM, contains N-terminal SH3 domain, DUF1202 family [General function prediction only]. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| CEI73566.1 | 1.36e-278 | 1 | 732 | 1 | 808 |
| QYE98702.1 | 2.93e-265 | 1 | 733 | 2 | 811 |
| CEK37256.1 | 1.69e-252 | 1 | 733 | 2 | 899 |
| CEJ72783.1 | 4.21e-252 | 1 | 733 | 2 | 895 |
| CED94424.1 | 6.07e-248 | 1 | 733 | 1 | 806 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 5WQW_A | 1.73e-37 | 513 | 734 | 38 | 271 | X-raystructure of catalytic domain of autolysin from Clostridium perfringens [Clostridium perfringens str. 13] |
| 6FXO_A | 4.73e-31 | 515 | 733 | 38 | 244 | ChainA, Bifunctional autolysin [Staphylococcus aureus subsp. aureus Mu50] |
| 4PI7_A | 1.11e-26 | 568 | 712 | 75 | 208 | ChainA, Autolysin E [Staphylococcus aureus subsp. aureus Mu50],4PI9_A Chain A, Autolysin E [Staphylococcus aureus subsp. aureus Mu50],4PIA_A Chain A, Autolysin E [Staphylococcus aureus subsp. aureus Mu50] |
| 4PI8_A | 7.01e-26 | 568 | 712 | 75 | 208 | ChainA, Autolysin E [Staphylococcus aureus subsp. aureus Mu50] |
| 6FXP_A | 4.23e-23 | 496 | 728 | 21 | 236 | ChainA, Uncharacterized protein [Staphylococcus aureus subsp. aureus Mu50],6FXP_B Chain B, Uncharacterized protein [Staphylococcus aureus subsp. aureus Mu50] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| P39848 | 7.31e-34 | 401 | 733 | 630 | 880 | Beta-N-acetylglucosaminidase OS=Bacillus subtilis (strain 168) OX=224308 GN=lytD PE=1 SV=1 |
| Q8CPQ1 | 1.80e-31 | 515 | 733 | 1129 | 1335 | Bifunctional autolysin OS=Staphylococcus epidermidis (strain ATCC 12228 / FDA PCI 1200) OX=176280 GN=atl PE=3 SV=1 |
| O33635 | 7.32e-31 | 515 | 733 | 1129 | 1335 | Bifunctional autolysin OS=Staphylococcus epidermidis OX=1282 GN=atl PE=1 SV=1 |
| Q5HQB9 | 7.32e-31 | 515 | 733 | 1129 | 1335 | Bifunctional autolysin OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) OX=176279 GN=atl PE=3 SV=1 |
| O32041 | 1.17e-28 | 102 | 457 | 36 | 394 | Putative N-acetylmuramoyl-L-alanine amidase YrvJ OS=Bacillus subtilis (strain 168) OX=224308 GN=yrvJ PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.000303 | 0.998887 | 0.000208 | 0.000210 | 0.000202 | 0.000172 |