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CAZyme Information: MGYG000001460_01051
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Romboutsia dakarensis | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes_A; Clostridia; Peptostreptococcales; Peptostreptococcaceae; Romboutsia; Romboutsia dakarensis | |||||||||||
| CAZyme ID | MGYG000001460_01051 | |||||||||||
| CAZy Family | GH33 | |||||||||||
| CAZyme Description | Sialidase | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 8254; End: 9465 Strand: + | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH33 | 39 | 384 | 1.3e-75 | 0.9473684210526315 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| cd15482 | Sialidase_non-viral | 2.04e-67 | 39 | 391 | 1 | 334 | Non-viral sialidases. Sialidases or neuraminidases function to bind and hydrolyze terminal sialic acid residues from various glycoconjugates, they play vital roles in pathogenesis, bacterial nutrition and cellular interactions. They have a six-bladed, beta-propeller fold with the non-viral sialidases containing 2-5 Asp-box motifs (most commonly Ser/Thr-X-Asp-[X]-Gly-X-Thr- Trp/Phe). This CD includes eubacterial and eukaryotic sialidases. |
| pfam13859 | BNR_3 | 5.12e-35 | 64 | 311 | 8 | 239 | BNR repeat-like domain. This family of proteins contains BNR-like repeats suggesting these proteins may act as sialidases. |
| 226840 | COG4409 | 1.49e-22 | 24 | 403 | 245 | 666 | NanH Neuraminidase (sialidase) [Carbohydrate transport and metabolism, Cell wall/membrane/envelope biogenesis]. |
| COG4409 | NanH | 5.77e-15 | 1 | 286 | 1 | 324 | Neuraminidase (sialidase) [Carbohydrate transport and metabolism, Cell wall/membrane/envelope biogenesis]. |
| pfam13088 | BNR_2 | 9.39e-10 | 48 | 283 | 51 | 252 | BNR repeat-like domain. This family of proteins contains BNR-like repeats suggesting these proteins may act as sialidases. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QYE96459.1 | 3.06e-251 | 1 | 398 | 1 | 398 |
| CEJ73729.1 | 4.68e-251 | 1 | 397 | 1 | 397 |
| AJF39122.1 | 1.34e-250 | 1 | 397 | 1 | 397 |
| CEK38205.1 | 1.34e-250 | 1 | 397 | 1 | 397 |
| AJF39123.1 | 3.14e-249 | 1 | 397 | 1 | 397 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 3SIL_A | 1.74e-66 | 52 | 391 | 31 | 369 | ChainA, SIALIDASE [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2],7AEY_AAA Chain AAA, Sialidase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] |
| 1DIL_A | 1.84e-66 | 52 | 391 | 33 | 371 | SialidaseFrom Salmonella Typhimurium Complexed With Apana And Epana Inhibitors [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2],1DIM_A Sialidase From Salmonella Typhimurium Complexed With Epana Inhibitor [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2],2SIL_A Chain A, SIALIDASE [Salmonella enterica subsp. enterica serovar Typhimurium],2SIM_A Chain A, Sialidase [Salmonella enterica subsp. enterica serovar Typhimurium] |
| 6TRG_XXX | 1.36e-65 | 52 | 391 | 31 | 369 | ChainXXX, Sialidase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2],6TVI_AAA Chain AAA, Sialidase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] |
| 7AF2_AAA | 1.91e-65 | 52 | 391 | 31 | 369 | ChainAAA, Sialidase [Salmonella enterica subsp. enterica serovar Typhimurium] |
| 2A75_A | 3.70e-35 | 27 | 387 | 19 | 379 | Trypanosomarangeli Sialidase In Complex With 2,3- Difluorosialic Acid (Covalent Intermediate) [Trypanosoma rangeli],2AGS_A Trypanosoma rangeli Sialidase in Complex with 2-Keto-3-deoxy-D-glycero-D-galacto-2,3-difluoro-nononic acid (2,3-difluoro-KDN) [Trypanosoma rangeli],2FHR_A Trypanosoma Rangeli Sialidase In Complex With 2,3- Difluorosialic Acid (Covalent Intermediate) [Trypanosoma rangeli] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| P15698 | 1.27e-249 | 1 | 397 | 1 | 397 | Sialidase OS=Paeniclostridium sordellii OX=1505 PE=1 SV=1 |
| P10481 | 8.79e-217 | 19 | 399 | 1 | 381 | Sialidase OS=Clostridium perfringens OX=1502 GN=nanH PE=1 SV=1 |
| P29768 | 1.04e-65 | 52 | 391 | 34 | 372 | Sialidase OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) OX=99287 GN=nanH PE=1 SV=4 |
| P31206 | 2.02e-30 | 50 | 381 | 199 | 527 | Sialidase OS=Bacteroides fragilis (strain YCH46) OX=295405 GN=nanH PE=3 SV=2 |
| P23253 | 1.00e-26 | 67 | 387 | 1 | 319 | Sialidase OS=Trypanosoma cruzi OX=5693 GN=TCNA PE=2 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.001016 | 0.670964 | 0.327249 | 0.000294 | 0.000249 | 0.000214 |