CAZyme Information: MGYG000001461_02967

Basic Information

• Species: Bacteroides neonati
• Lineage: Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; Bacteroides neonati
• CAZyme ID: MGYG000001461_02967
• CAZy Family: GH50
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
467	MGYG000001461_5|CGC7	52956.82	8.1187

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000001461	5024706	Isolate	not provided	not provided

• Gene Location: Start: 366146; End: 367549 Strand: -

Full Sequence      

MKHIIFLLLVMLPEISVYAQDSHFKVSARPWIKGQKEIPWKEFNTRTVAQLKGFIPVQQV
STNKYGSDINAPKLSSTGFFRVEQIQNRWWMIDPEGYRHIQKVVVGLRLGPSERNKNAMS
QRFGSTSVWIEQSAQLLHSLGFSGTGSWSDEESIAAYNASHKEVLTRSTILSMMSGYGKK
RGGTYQLPGNTGYPNQCIFVFDPDFEIYCDEVAKKLAQNASDPHIIGYFSDNELPLGLNN
LEGYLTLANPNDPGRVYAEKWLKQQGVSPEEITDRHRADFAGIVADRYYQIVSSAIRKYD
PNHLFLGSRLHGGAKFIRPIIEAAGRYCDIVSINYYGDWTPNAQAMYSWGEWAKKPFIIT
EFYTKGMDSGLGNTTGAGFTVQTQQDRGYAFQHFVLGLIESGNCVGWHWFRYQDNDPTAK
GADPSNLDSNKGLVDNEYQPYLPLTHAMKELNINAYRLADFMDKRKR

Enzyme Prediction     

No EC number prediction in MGYG000001461_02967.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH50	116	456	4.8e-80	0.552833078101072

CDD Domains     

MGYG000001461_02967 has no CDD domain.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
ALJ46941.1	1.88e-276	1	464	1	464
QRQ59048.1	1.88e-276	1	464	1	464
SCV06348.1	1.95e-276	1	464	2	465
QUR46808.1	2.19e-275	1	464	1	464
QDH57474.1	3.10e-275	1	464	1	464

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
5T3B_A	4.01e-89	29	464	41	481	ChainA, Glycoside Hydrolase [Phocaeicola plebeius],5T3B_B Chain B, Glycoside Hydrolase [Phocaeicola plebeius]
4BQ2_A	4.12e-31	61	456	243	743	Structuralanalysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ2_B Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ2_C Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ2_D Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ3_A Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ3_B Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ3_C Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ3_D Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40]
4BQ4_A	1.00e-30	61	456	243	743	Structuralanalysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ4_B Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ5_A Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ5_B Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40]
6XJ9_A	1.15e-28	63	456	264	759	Structureof PfGH50B [Pseudoalteromonas fuliginea],6XJ9_B Structure of PfGH50B [Pseudoalteromonas fuliginea]
5Z6P_A	1.39e-19	47	456	248	759	Thecrystal structure of an agarase, AgWH50C [Agarivorans gilvus],5Z6P_B The crystal structure of an agarase, AgWH50C [Agarivorans gilvus]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
P48840	7.78e-27	65	458	476	951	Beta-agarase B OS=Vibrio sp. (strain JT0107) OX=47913 GN=agaB PE=3 SV=1
P48839	1.57e-18	117	456	545	913	Beta-agarase A OS=Vibrio sp. (strain JT0107) OX=47913 GN=agaA PE=3 SV=1

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000277	0.999091	0.000180	0.000147	0.000139	0.000136

TMHMM  Annotations     

There is no transmembrane helices in MGYG000001461_02967.