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CAZyme Information: MGYG000001462_01618
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Helicobacter_B macacae | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Campylobacterota; Campylobacteria; Campylobacterales; Helicobacteraceae; Helicobacter_B; Helicobacter_B macacae | |||||||||||
| CAZyme ID | MGYG000001462_01618 | |||||||||||
| CAZy Family | GT19 | |||||||||||
| CAZyme Description | Lipid-A-disaccharide synthase | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 226418; End: 227944 Strand: + | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GT19 | 123 | 458 | 5.7e-83 | 0.827683615819209 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| PRK14089 | PRK14089 | 6.42e-141 | 124 | 505 | 40 | 344 | lipid-A-disaccharide synthase. |
| TIGR00215 | lpxB | 1.52e-80 | 124 | 452 | 51 | 354 | lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides] |
| COG0763 | LpxB | 4.22e-78 | 123 | 464 | 46 | 352 | Lipid A disaccharide synthetase [Cell wall/membrane/envelope biogenesis]. |
| pfam02684 | LpxB | 1.48e-74 | 123 | 452 | 43 | 348 | Lipid-A-disaccharide synthetase. This is a family of lipid-A-disaccharide synthetases, EC:2.4.2.128. These enzymes catalyze the reaction: UDP-2,3-bis(3-hydroxytetradecanoyl) glucosamine + 2,3-bis(3-hydroxytetradecanoyl)-beta-D-glucosaminyl 1-phosphate <=> UDP + 2,3-bis(3-hydroxytetradecanoyl)-D-glucosaminyl-1,6 -beta-D-2,3-bis(3-hydroxytetradecanoyl)-beta-D-glucosaminyl 1-phosphate. These enzymes catalyze the fist disaccharide step in the synthesis of lipid-A-disaccharide. |
| PRK00025 | lpxB | 8.63e-57 | 123 | 415 | 46 | 311 | lipid-A-disaccharide synthase; Reviewed |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| SQH71664.1 | 2.96e-98 | 125 | 473 | 40 | 339 |
| CBG40162.1 | 2.96e-98 | 125 | 473 | 40 | 339 |
| BAJ55094.1 | 3.83e-98 | 95 | 475 | 16 | 343 |
| BAW60778.1 | 2.15e-97 | 95 | 475 | 16 | 343 |
| QQX49349.1 | 4.29e-97 | 95 | 475 | 16 | 343 |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| B2USW3 | 3.42e-97 | 95 | 475 | 16 | 343 | Lipid-A-disaccharide synthase OS=Helicobacter pylori (strain Shi470) OX=512562 GN=lpxB PE=3 SV=1 |
| Q17WJ2 | 1.08e-95 | 95 | 473 | 16 | 341 | Lipid-A-disaccharide synthase OS=Helicobacter acinonychis (strain Sheeba) OX=382638 GN=lpxB PE=3 SV=1 |
| Q1CT05 | 1.08e-95 | 95 | 475 | 16 | 343 | Lipid-A-disaccharide synthase OS=Helicobacter pylori (strain HPAG1) OX=357544 GN=lpxB PE=3 SV=1 |
| B6JM91 | 3.03e-95 | 95 | 475 | 16 | 343 | Lipid-A-disaccharide synthase OS=Helicobacter pylori (strain P12) OX=570508 GN=lpxB PE=3 SV=1 |
| Q9ZKY2 | 8.53e-95 | 95 | 473 | 16 | 341 | Lipid-A-disaccharide synthase OS=Helicobacter pylori (strain J99 / ATCC 700824) OX=85963 GN=lpxB PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.999104 | 0.000893 | 0.000013 | 0.000004 | 0.000002 | 0.000004 |