You are browsing environment: HUMAN GUT

CAZyme Information: MGYG000001467_01680

You are here: Home > Sequence: MGYG000001467_01680

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Clostridium_E jeddahense
Lineage Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Acutalibacteraceae; Clostridium_E; Clostridium_E jeddahense
CAZyme ID MGYG000001467_01680
CAZy Family GT2
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
339 MGYG000001467_17|CGC1 40003.43 6.0569
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001467 3613503 Isolate not provided Asia
Gene Location Start: 63613;  End: 64632  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001467_01680.

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
cd02511 Beta4Glucosyltransferase 4.53e-13 4 186 26 219
UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of lipooligosaccharide. UDP-glucose: lipooligosaccharide (LOS) beta-1-4-glucosyltransferase catalyzes the addition of the first residue, glucose, of the lacto-N-neotetrase structure to HepI of the LOS inner core. LOS is the major constituent of the outer leaflet of the outer membrane of gram-positive bacteria. It consists of a short oligosaccharide chain of variable composition (alpha chain) attached to a branched inner core which is lined in turn to lipid A. Beta 1,4 glucosyltransferase is required to attach the alpha chain to the inner core.
COG0463 WcaA 5.85e-04 1 217 29 268
Glycosyltransferase involved in cell wall bisynthesis [Cell wall/membrane/envelope biogenesis].
COG0457 TPR 0.002 156 330 115 280
Tetratricopeptide (TPR) repeat [General function prediction only].
PRK13915 PRK13915 0.002 5 36 63 95
putative glucosyl-3-phosphoglycerate synthase; Provisional
sd00006 TPR 0.002 171 273 2 94
Tetratricopeptide repeat. The Tetratricopeptide repeat (TPR) typically contains 34 amino acids and is found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans. It is present in a variety of proteins including those involved in chaperone, cell-cycle, transcription, and protein transport complexes. The number of TPR motifs varies among proteins. Those containing 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accommodate an alpha-helix of a target protein. It has been proposed that TPR proteins preferentially interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
CAB1239995.1 1.65e-166 1 335 26 362
QAT50106.1 5.29e-150 1 329 26 356
ADL06103.1 3.30e-147 1 338 25 372
QRV19781.1 3.30e-147 1 338 25 372
QOX65321.1 3.67e-147 1 329 26 356

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

1.000096 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001467_01680.