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CAZyme Information: MGYG000001470_00626
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Virgibacillus kapii | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes; Bacilli; Bacillales_D; Amphibacillaceae; Virgibacillus; Virgibacillus kapii | |||||||||||
| CAZyme ID | MGYG000001470_00626 | |||||||||||
| CAZy Family | GH73 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 646515; End: 648602 Strand: - | |||||||||||
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| COG4193 | LytD | 2.86e-68 | 191 | 450 | 1 | 245 | Beta- N-acetylglucosaminidase [Carbohydrate transport and metabolism]. |
| smart00047 | LYZ2 | 1.13e-27 | 283 | 440 | 1 | 146 | Lysozyme subfamily 2. Eubacterial enzymes distantly related to eukaryotic lysozymes. |
| pfam08239 | SH3_3 | 7.39e-13 | 480 | 530 | 1 | 53 | Bacterial SH3 domain. |
| NF033190 | inl_like_NEAT_1 | 4.67e-12 | 27 | 134 | 644 | 752 | NEAT domain-containing leucine-rich repeat protein. Members of this family have an N-terminal NEAT (near transporter) domain often associated with iron transport, followed by a leucine-rich repeat region with significant sequence similarity to the internalins of Listeria monocytogenes. However, since Bacillus cereus (from which this protein was described, in PMID:16978259) is not considered an intracellular pathogen, and the function may be iron transport rather than internalization, applying the name "internalin" to this family probably would be misleading. |
| pfam00395 | SLH | 2.72e-10 | 85 | 126 | 1 | 42 | S-layer homology domain. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QRZ18453.1 | 0.0 | 1 | 693 | 1 | 695 |
| API91764.1 | 0.0 | 1 | 625 | 1 | 628 |
| AVR00509.1 | 1.35e-292 | 1 | 689 | 13 | 701 |
| QTY15979.1 | 7.20e-178 | 313 | 694 | 1 | 385 |
| AUS85359.1 | 3.34e-142 | 17 | 620 | 16 | 614 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 6FXO_A | 3.25e-45 | 247 | 449 | 45 | 243 | ChainA, Bifunctional autolysin [Staphylococcus aureus subsp. aureus Mu50] |
| 4PI7_A | 9.52e-36 | 217 | 423 | 8 | 201 | ChainA, Autolysin E [Staphylococcus aureus subsp. aureus Mu50],4PI9_A Chain A, Autolysin E [Staphylococcus aureus subsp. aureus Mu50],4PIA_A Chain A, Autolysin E [Staphylococcus aureus subsp. aureus Mu50] |
| 4PI8_A | 6.25e-35 | 217 | 423 | 8 | 201 | ChainA, Autolysin E [Staphylococcus aureus subsp. aureus Mu50] |
| 6U0O_B | 8.96e-34 | 242 | 434 | 79 | 260 | ChainB, LYZ2 domain-containing protein [Staphylococcus aureus subsp. aureus NCTC 8325] |
| 6FXP_A | 1.50e-33 | 242 | 434 | 49 | 230 | ChainA, Uncharacterized protein [Staphylococcus aureus subsp. aureus Mu50],6FXP_B Chain B, Uncharacterized protein [Staphylococcus aureus subsp. aureus Mu50] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| P39848 | 6.86e-55 | 242 | 449 | 682 | 879 | Beta-N-acetylglucosaminidase OS=Bacillus subtilis (strain 168) OX=224308 GN=lytD PE=1 SV=1 |
| O33635 | 5.17e-42 | 208 | 449 | 1093 | 1334 | Bifunctional autolysin OS=Staphylococcus epidermidis OX=1282 GN=atl PE=1 SV=1 |
| Q5HQB9 | 5.17e-42 | 208 | 449 | 1093 | 1334 | Bifunctional autolysin OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) OX=176279 GN=atl PE=3 SV=1 |
| Q8CPQ1 | 2.93e-41 | 208 | 449 | 1093 | 1334 | Bifunctional autolysin OS=Staphylococcus epidermidis (strain ATCC 12228 / FDA PCI 1200) OX=176280 GN=atl PE=3 SV=1 |
| Q5HH31 | 2.10e-40 | 227 | 449 | 1041 | 1255 | Bifunctional autolysin OS=Staphylococcus aureus (strain COL) OX=93062 GN=atl PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.002684 | 0.995928 | 0.000333 | 0.000350 | 0.000322 | 0.000342 |
