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CAZyme Information: MGYG000001473_01421

You are here: Home > Sequence: MGYG000001473_01421

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Anaerosalibacter massiliensis
Lineage Bacteria; Firmicutes_A; Clostridia; Tissierellales; Sporanaerobacteraceae; Anaerosalibacter; Anaerosalibacter massiliensis
CAZyme ID MGYG000001473_01421
CAZy Family CBM50
CAZyme Description Autolysin
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
307 33505.7 8.8162
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001473 3196506 Isolate not provided not provided
Gene Location Start: 94989;  End: 95912  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001473_01421.

CAZyme Signature Domains help

Family Start End Evalue family coverage
CBM50 194 237 1.1e-16 0.975

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
smart00257 LysM 4.54e-17 193 236 1 44
Lysin motif.
cd00118 LysM 2.03e-16 193 236 2 45
Lysin Motif is a small domain involved in binding peptidoglycan. LysM, a small globular domain with approximately 40 amino acids, is a widespread protein module involved in binding peptidoglycan in bacteria and chitin in eukaryotes. The domain was originally identified in enzymes that degrade bacterial cell walls, but proteins involved in many other biological functions also contain this domain. It has been reported that the LysM domain functions as a signal for specific plant-bacteria recognition in bacterial pathogenesis. Many of these enzymes are modular and are composed of catalytic units linked to one or several repeats of LysM domains. LysM domains are found in bacteria and eukaryotes.
PRK10783 mltD 6.57e-16 77 173 346 441
membrane-bound lytic murein transglycosylase D; Provisional
smart00257 LysM 1.13e-15 77 119 2 44
Lysin motif.
smart00257 LysM 3.31e-15 18 60 2 44
Lysin motif.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
SHD78284.1 2.39e-129 1 238 1 235
QAT63505.1 2.31e-122 20 296 1 269
QAT61792.1 1.57e-116 1 237 1 234
QQY79592.1 1.32e-115 1 238 1 239
ABW19482.1 1.04e-111 9 300 301 592

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4B8V_A 2.01e-19 77 238 44 218
ChainA, Extracellular Protein 6 [Fulvia fulva],4B9H_A Chain A, Extracellular Protein 6 [Fulvia fulva]
5K2L_A 5.54e-11 18 61 5 48
Crystalstructure of LysM domain from Volvox carteri chitinase [Volvox carteri f. nagariensis],5YZK_A Solution structure of LysM domain from a chitinase derived from Volvox carteri [Volvox carteri f. nagariensis]
5YZ6_A 5.15e-10 18 61 5 48
Solutionstructure of LysM domain from a chitinase derived from Volvox carteri [Volvox carteri f. nagariensis]
4PXV_A 2.51e-09 136 178 5 47
CrystalStructure of LysM domain from pteris ryukyuensis chitinase A [Pteris ryukyuensis],4PXV_B Crystal Structure of LysM domain from pteris ryukyuensis chitinase A [Pteris ryukyuensis],4PXV_C Crystal Structure of LysM domain from pteris ryukyuensis chitinase A [Pteris ryukyuensis],4PXV_D Crystal Structure of LysM domain from pteris ryukyuensis chitinase A [Pteris ryukyuensis],5YLG_A Crystal Structure of LysM domain from pteris ryukyuensis chitinase A [Pteris ryukyuensis],5YLG_B Crystal Structure of LysM domain from pteris ryukyuensis chitinase A [Pteris ryukyuensis],5YLG_C Crystal Structure of LysM domain from pteris ryukyuensis chitinase A [Pteris ryukyuensis],5YLG_D Crystal Structure of LysM domain from pteris ryukyuensis chitinase A [Pteris ryukyuensis]
5BUM_A 9.13e-09 135 178 5 48
CrystalStructure of LysM domain from Equisetum arvense chitinase A [Equisetum arvense],5BUM_B Crystal Structure of LysM domain from Equisetum arvense chitinase A [Equisetum arvense]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P37710 5.87e-17 18 295 431 736
Autolysin OS=Enterococcus faecalis (strain ATCC 700802 / V583) OX=226185 GN=EF_0799 PE=1 SV=2
O05495 2.16e-13 134 237 2 93
Putative sporulation-specific glycosylase YdhD OS=Bacillus subtilis (strain 168) OX=224308 GN=ydhD PE=1 SV=2
Q37896 7.39e-12 18 117 165 260
Endolysin OS=Bacillus phage B103 OX=10778 GN=15 PE=3 SV=1
P11187 5.99e-11 18 117 163 255
Endolysin OS=Bacillus phage phi29 OX=10756 GN=15 PE=1 SV=1
P07540 5.99e-11 18 117 163 255
Endolysin OS=Bacillus phage PZA OX=10757 GN=15 PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000081 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001473_01421.