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CAZyme Information: MGYG000001474_03965

You are here: Home > Sequence: MGYG000001474_03965

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Clostridium_J sp000821305
Lineage Bacteria; Firmicutes_A; Clostridia; Clostridiales; Clostridiaceae; Clostridium_J; Clostridium_J sp000821305
CAZyme ID MGYG000001474_03965
CAZy Family GH73
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
749 83072.34 4.4511
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001474 4325182 Isolate not provided not provided
Gene Location Start: 1413043;  End: 1415292  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001474_03965.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH73 457 569 3.3e-19 0.9375

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG4193 LytD 1.27e-16 406 566 54 222
Beta- N-acetylglucosaminidase [Carbohydrate transport and metabolism].
pfam01832 Glucosaminidase 1.90e-12 456 536 1 72
Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase. This family includes Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase EC:3.2.1.96. As well as the flageller protein J that has been shown to hydrolyze peptidoglycan.
smart00047 LYZ2 2.85e-07 460 567 20 134
Lysozyme subfamily 2. Eubacterial enzymes distantly related to eukaryotic lysozymes.
COG1705 FlgJ 2.97e-06 460 564 55 174
Flagellum-specific peptidoglycan hydrolase FlgJ [Cell wall/membrane/envelope biogenesis, Cell motility].
NF038016 sporang_Gsm 2.04e-04 461 498 173 210
sporangiospore maturation cell wall hydrolase GsmA. The peptidoglycan-hydrolyzing enzyme GsmA occurs in some sporangia-forming members of the Actinobacteria, such as Actinoplanes missouriensis, and is required for proper separation of spores. GsmA proteins have one or two SH3 domains N-terminal to the hydrolase domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QAS62016.1 6.04e-223 141 748 39 641
AYE33874.1 6.04e-223 141 748 39 641
QBJ74559.1 7.70e-208 136 748 34 631
SLK13348.1 7.70e-208 136 748 34 631
ATD54275.1 7.70e-208 136 748 34 631

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4Q2W_A 3.01e-22 431 566 147 276
CrystalStructure of pneumococcal peptidoglycan hydrolase LytB [Streptococcus pneumoniae TIGR4]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P59205 3.87e-20 431 566 515 644
Putative endo-beta-N-acetylglucosaminidase OS=Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4) OX=170187 GN=lytB PE=1 SV=1
P59206 4.26e-20 431 566 559 688
Putative endo-beta-N-acetylglucosaminidase OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) OX=171101 GN=lytB PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000458 0.998757 0.000264 0.000166 0.000168 0.000157

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001474_03965.