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CAZyme Information: MGYG000001475_00547

You are here: Home > Sequence: MGYG000001475_00547

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Neobacillus rubiinfantis
Lineage Bacteria; Firmicutes; Bacilli; Bacillales_B; DSM-18226; Neobacillus; Neobacillus rubiinfantis
CAZyme ID MGYG000001475_00547
CAZy Family GH73
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
681 MGYG000001475_11|CGC4 75767.91 10.549
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001475 4309569 Isolate not provided not provided
Gene Location Start: 305882;  End: 307927  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001475_00547.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH73 389 516 4.7e-22 0.96875

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG4193 LytD 2.25e-18 351 537 69 242
Beta- N-acetylglucosaminidase [Carbohydrate transport and metabolism].
pfam01832 Glucosaminidase 1.96e-13 389 458 1 81
Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase. This family includes Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase EC:3.2.1.96. As well as the flageller protein J that has been shown to hydrolyze peptidoglycan.
COG3103 YgiM 6.29e-09 36 196 16 151
Uncharacterized conserved protein YgiM, contains N-terminal SH3 domain, DUF1202 family [General function prediction only].
smart00047 LYZ2 2.43e-08 381 525 5 145
Lysozyme subfamily 2. Eubacterial enzymes distantly related to eukaryotic lysozymes.
pfam08239 SH3_3 4.80e-08 296 345 3 54
Bacterial SH3 domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AZU63990.1 0.0 1 681 1 764
AKM20445.1 1.35e-182 1 681 1 772
AOL35815.1 1.97e-182 1 681 1 773
ARP44162.1 2.06e-182 47 681 129 866
QQX25801.1 5.70e-171 1 681 1 812

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4Q2W_A 3.25e-17 383 523 166 286
CrystalStructure of pneumococcal peptidoglycan hydrolase LytB [Streptococcus pneumoniae TIGR4]
4PI7_A 6.03e-10 351 515 53 210
ChainA, Autolysin E [Staphylococcus aureus subsp. aureus Mu50],4PI9_A Chain A, Autolysin E [Staphylococcus aureus subsp. aureus Mu50],4PIA_A Chain A, Autolysin E [Staphylococcus aureus subsp. aureus Mu50]
4PI8_A 3.62e-09 351 515 53 210
ChainA, Autolysin E [Staphylococcus aureus subsp. aureus Mu50]
6FXO_A 3.74e-07 339 438 49 156
ChainA, Bifunctional autolysin [Staphylococcus aureus subsp. aureus Mu50]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P59205 4.47e-17 383 523 534 654
Putative endo-beta-N-acetylglucosaminidase OS=Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4) OX=170187 GN=lytB PE=1 SV=1
P59206 4.81e-17 383 523 578 698
Putative endo-beta-N-acetylglucosaminidase OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) OX=171101 GN=lytB PE=1 SV=1
P39848 1.52e-09 289 438 632 791
Beta-N-acetylglucosaminidase OS=Bacillus subtilis (strain 168) OX=224308 GN=lytD PE=1 SV=1
Q5HQB9 1.21e-06 327 537 1128 1332
Bifunctional autolysin OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) OX=176279 GN=atl PE=3 SV=1
Q8CPQ1 1.21e-06 327 537 1128 1332
Bifunctional autolysin OS=Staphylococcus epidermidis (strain ATCC 12228 / FDA PCI 1200) OX=176280 GN=atl PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.001788 0.997060 0.000367 0.000305 0.000244 0.000213

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001475_00547.