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CAZyme Information: MGYG000001475_01088

You are here: Home > Sequence: MGYG000001475_01088

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Neobacillus rubiinfantis
Lineage Bacteria; Firmicutes; Bacilli; Bacillales_B; DSM-18226; Neobacillus; Neobacillus rubiinfantis
CAZyme ID MGYG000001475_01088
CAZy Family GH73
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
851 MGYG000001475_16|CGC2 90986.38 10.2165
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001475 4309569 Isolate not provided not provided
Gene Location Start: 127770;  End: 130325  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.-

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH73 702 833 2e-21 0.9609375

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG4193 LytD 4.52e-74 643 850 45 244
Beta- N-acetylglucosaminidase [Carbohydrate transport and metabolism].
smart00047 LYZ2 4.33e-28 691 842 2 147
Lysozyme subfamily 2. Eubacterial enzymes distantly related to eukaryotic lysozymes.
COG3103 YgiM 1.97e-10 205 425 26 203
Uncharacterized conserved protein YgiM, contains N-terminal SH3 domain, DUF1202 family [General function prediction only].
pfam08239 SH3_3 8.57e-10 289 339 1 53
Bacterial SH3 domain.
pfam08239 SH3_3 1.33e-09 483 534 1 54
Bacterial SH3 domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AZU64774.1 0.0 1 850 1 880
QNF29477.1 1.80e-302 21 850 1 900
QGQ46914.1 1.32e-290 50 851 272 1051
AZV62496.1 1.75e-282 45 850 186 955
AXN38379.1 4.33e-279 21 850 1 960

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6FXO_A 1.76e-48 646 850 37 243
ChainA, Bifunctional autolysin [Staphylococcus aureus subsp. aureus Mu50]
6U0O_B 1.20e-38 621 824 46 249
ChainB, LYZ2 domain-containing protein [Staphylococcus aureus subsp. aureus NCTC 8325]
6FXP_A 3.41e-38 621 824 16 219
ChainA, Uncharacterized protein [Staphylococcus aureus subsp. aureus Mu50],6FXP_B Chain B, Uncharacterized protein [Staphylococcus aureus subsp. aureus Mu50]
4PI7_A 1.98e-37 646 835 33 212
ChainA, Autolysin E [Staphylococcus aureus subsp. aureus Mu50],4PI9_A Chain A, Autolysin E [Staphylococcus aureus subsp. aureus Mu50],4PIA_A Chain A, Autolysin E [Staphylococcus aureus subsp. aureus Mu50]
4PI8_A 1.27e-36 646 835 33 212
ChainA, Autolysin E [Staphylococcus aureus subsp. aureus Mu50]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P39848 1.27e-72 555 850 599 879
Beta-N-acetylglucosaminidase OS=Bacillus subtilis (strain 168) OX=224308 GN=lytD PE=1 SV=1
Q6GAG0 3.84e-43 646 850 1043 1249
Bifunctional autolysin OS=Staphylococcus aureus (strain MSSA476) OX=282459 GN=atl PE=3 SV=1
Q8NX96 3.86e-43 646 850 1049 1255
Bifunctional autolysin OS=Staphylococcus aureus (strain MW2) OX=196620 GN=atl PE=3 SV=1
Q99V41 5.08e-43 646 850 1041 1247
Bifunctional autolysin OS=Staphylococcus aureus (strain N315) OX=158879 GN=atl PE=1 SV=1
Q931U5 5.08e-43 646 850 1041 1247
Bifunctional autolysin OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) OX=158878 GN=atl PE=1 SV=2

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000700 0.998568 0.000271 0.000175 0.000155 0.000141

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001475_01088.