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CAZyme Information: MGYG000001477_02579

You are here: Home > Sequence: MGYG000001477_02579

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Clostridium_L amazonitimonense
Lineage Bacteria; Firmicutes_A; Clostridia; Clostridiales; Clostridiaceae; Clostridium_L; Clostridium_L amazonitimonense
CAZyme ID MGYG000001477_02579
CAZy Family GH171
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
396 MGYG000001477_7|CGC17 45321.81 5.1005
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001477 3750216 Isolate not provided not provided
Gene Location Start: 1887787;  End: 1888977  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001477_02579.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH171 38 395 2.4e-144 0.9943661971830986

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam07075 DUF1343 0.0 38 395 1 362
Protein of unknown function (DUF1343). This family consists of several hypothetical bacterial proteins of around 400 residues in length. The function of this family is unknown.
COG3876 YbbC 8.62e-172 3 395 13 409
Uncharacterized conserved protein YbbC, DUF1343 family [Function unknown].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
SNX53310.1 2.77e-175 21 395 5 379
AUS95567.1 6.20e-175 12 395 2 385
ADH60056.1 1.99e-172 21 395 5 379
AAM23515.1 2.67e-170 21 395 5 379
ADZ19231.1 7.65e-156 17 395 3 381

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4K05_A 3.50e-92 15 396 10 399
Crystalstructure of a DUF1343 family protein (BF0371) from Bacteroides fragilis NCTC 9343 at 1.65 A resolution [Bacteroides fragilis NCTC 9343],4K05_B Crystal structure of a DUF1343 family protein (BF0371) from Bacteroides fragilis NCTC 9343 at 1.65 A resolution [Bacteroides fragilis NCTC 9343]
4JJA_A 6.41e-62 15 395 3 368
Crystalstructure of a DUF1343 family protein (BF0379) from Bacteroides fragilis NCTC 9343 at 1.30 A resolution [Bacteroides fragilis NCTC 9343]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P40407 7.57e-130 15 395 34 414
Uncharacterized protein YbbC OS=Bacillus subtilis (strain 168) OX=224308 GN=ybbC PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000053 0.000003 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001477_02579.