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CAZyme Information: MGYG000001479_00066

You are here: Home > Sequence: MGYG000001479_00066

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Clostridium_AA polynesiense
Lineage Bacteria; Firmicutes_A; Clostridia; Clostridiales; Clostridiaceae; Clostridium_AA; Clostridium_AA polynesiense
CAZyme ID MGYG000001479_00066
CAZy Family GH39
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
450 MGYG000001479_3|CGC1 53060.92 5.1208
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001479 3560738 Isolate not provided not provided
Gene Location Start: 13586;  End: 14938  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001479_00066.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH39 190 404 3e-22 0.4385150812064965

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG3664 XynB 5.66e-08 291 420 273 396
Beta-xylosidase [Carbohydrate transport and metabolism].
pfam12833 HTH_18 8.40e-08 1 36 46 81
Helix-turn-helix domain.
smart00342 HTH_ARAC 1.41e-07 1 34 51 84
helix_turn_helix, arabinose operon control protein.
pfam01229 Glyco_hydro_39 2.68e-07 190 421 225 460
Glycosyl hydrolases family 39.
COG2207 AraC 8.54e-06 1 38 86 123
AraC-type DNA-binding domain and AraC-containing proteins [Transcription].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QXE20743.1 2.52e-187 2 450 240 688
QAT40622.1 2.52e-187 2 449 240 687
AZV56511.1 1.88e-184 2 450 240 688
QPJ85154.1 9.74e-179 2 449 239 685
QLY81077.1 1.72e-170 1 450 239 688

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000061 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001479_00066.