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CAZyme Information: MGYG000001479_02951

You are here: Home > Sequence: MGYG000001479_02951

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Clostridium_AA polynesiense
Lineage Bacteria; Firmicutes_A; Clostridia; Clostridiales; Clostridiaceae; Clostridium_AA; Clostridium_AA polynesiense
CAZyme ID MGYG000001479_02951
CAZy Family GH171
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
426 MGYG000001479_142|CGC2 47459.21 7.743
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001479 3560738 Isolate not provided not provided
Gene Location Start: 71663;  End: 72943  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001479_02951.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH171 57 422 1.4e-141 0.9971830985915493

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam07075 DUF1343 0.0 58 422 1 362
Protein of unknown function (DUF1343). This family consists of several hypothetical bacterial proteins of around 400 residues in length. The function of this family is unknown.
COG3876 YbbC 1.34e-174 1 422 1 409
Uncharacterized conserved protein YbbC, DUF1343 family [Function unknown].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QUP87821.1 4.81e-152 11 423 7 411
ACQ69964.1 1.94e-151 14 423 10 411
QPI68353.1 1.28e-149 14 423 10 411
ARP42412.1 9.31e-149 27 423 24 418
ATO36252.1 9.31e-149 27 423 24 418

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4K05_A 7.98e-84 29 423 2 399
Crystalstructure of a DUF1343 family protein (BF0371) from Bacteroides fragilis NCTC 9343 at 1.65 A resolution [Bacteroides fragilis NCTC 9343],4K05_B Crystal structure of a DUF1343 family protein (BF0371) from Bacteroides fragilis NCTC 9343 at 1.65 A resolution [Bacteroides fragilis NCTC 9343]
4JJA_A 7.00e-53 34 422 2 368
Crystalstructure of a DUF1343 family protein (BF0379) from Bacteroides fragilis NCTC 9343 at 1.30 A resolution [Bacteroides fragilis NCTC 9343]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P40407 2.15e-147 34 422 33 414
Uncharacterized protein YbbC OS=Bacillus subtilis (strain 168) OX=224308 GN=ybbC PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000476 0.998622 0.000369 0.000180 0.000168 0.000156

TMHMM  Annotations      download full data without filtering help

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