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CAZyme Information: MGYG000001480_00023

You are here: Home > Sequence: MGYG000001480_00023

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Pauljensenia polynesiensis
Lineage Bacteria; Actinobacteriota; Actinomycetia; Actinomycetales; Actinomycetaceae; Pauljensenia; Pauljensenia polynesiensis
CAZyme ID MGYG000001480_00023
CAZy Family GH30
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1412 146168.68 4.104
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001480 2878449 Isolate not provided not provided
Gene Location Start: 10567;  End: 14805  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001480_00023.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH30 62 602 2.4e-174 0.9978070175438597

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam14587 Glyco_hydr_30_2 2.84e-21 76 415 18 359
O-Glycosyl hydrolase family 30.
pfam07532 Big_4 1.22e-06 778 832 2 56
Bacterial Ig-like domain (group 4). This family consists of bacterial domains with an Ig-like fold. Members of this family are found in a variety of bacterial surface proteins.
pfam14200 RicinB_lectin_2 3.82e-06 659 757 2 89
Ricin-type beta-trefoil lectin domain-like.
pfam02057 Glyco_hydro_59 7.53e-06 84 416 9 258
Glycosyl hydrolase family 59.
pfam19077 Big_13 5.31e-05 1210 1260 53 102
Bacterial Ig-like domain. Presumed domain found as tandem repeats of high sequence identity in bacterial cell surface proteins.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QGQ18080.1 1.14e-301 37 1136 18 1098
QCB92335.1 2.97e-301 37 1134 28 1103
QVI62156.1 7.55e-285 60 1134 40 1093
QHC64339.1 4.77e-282 12 1134 2 1100
QHC56726.1 5.46e-281 47 1134 23 1089

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3CLW_A 1.71e-10 89 312 36 227
Crystalstructure of conserved exported protein from Bacteroides fragilis [Bacteroides fragilis NCTC 9343],3CLW_B Crystal structure of conserved exported protein from Bacteroides fragilis [Bacteroides fragilis NCTC 9343],3CLW_C Crystal structure of conserved exported protein from Bacteroides fragilis [Bacteroides fragilis NCTC 9343],3CLW_D Crystal structure of conserved exported protein from Bacteroides fragilis [Bacteroides fragilis NCTC 9343],3CLW_E Crystal structure of conserved exported protein from Bacteroides fragilis [Bacteroides fragilis NCTC 9343],3CLW_F Crystal structure of conserved exported protein from Bacteroides fragilis [Bacteroides fragilis NCTC 9343]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
A0A401ETL2 1.94e-171 49 1122 26 1167
Exo-beta-1,6-galactobiohydrolase OS=Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 / JCM 1217 / NCTC 11818 / E194b) OX=565042 GN=bl1,6Gal PE=1 SV=1
Q76FP5 3.86e-29 61 542 23 422
Endo-beta-1,6-galactanase OS=Hypocrea rufa OX=5547 GN=6GAL PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.007432 0.785640 0.001272 0.201796 0.003554 0.000283

TMHMM  Annotations      download full data without filtering help

start end
21 43
1387 1406