dbCAN-seq: a database of CAZyme sequence and annotation

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CAZyme Information: MGYG000001481_00281

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Basic Information help

Species

Neobacillus sp000821085

Lineage

Bacteria; Firmicutes; Bacilli; Bacillales_B; DSM-18226; Neobacillus; Neobacillus sp000821085

CAZyme ID

MGYG000001481_00281

CAZy Family

GH171

CAZyme Description

hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
433		48323.36	5.6285

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000001481	4702581	Isolate	not provided	not provided

Gene Location

Start: 281437; End: 282738 Strand: +

Full Sequence Download help

Enzyme Prediction help

No EC number prediction in MGYG000001481_00281.

CAZyme Signature Domains help

Family	Start	End	Evalue	family coverage
GH171	70	433	2.3e-152	0.9971830985915493

CDD Domains download full data without filtering help

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
COG3876	YbbC	0.0	42	433	19	409	Uncharacterized conserved protein YbbC, DUF1343 family [Function unknown].
pfam07075	DUF1343	0.0	71	433	1	362	Protein of unknown function (DUF1343). This family consists of several hypothetical bacterial proteins of around 400 residues in length. The function of this family is unknown.
cd06308	PBP1_sensor_kinase-like	1.42e-04	172	253	73	135	periplasmic binding domain of two-component sensor kinase signaling systems. Periplasmic binding domain of two-component sensor kinase signaling systems, some of which are fused with a C-terminal histidine kinase A domain (HisK) and/or a signal receiver domain (REC). Members of this group share homology with a family of pentose/hexose sugar-binding proteins of the type 1 periplasmic binding protein superfamily and are predicted to be involved in sensing of environmental stimuli; their substrate specificities, however, are not known in detail.
cd06309	PBP1_galactofuranose_YtfQ-like	0.003	172	269	72	157	periplasmic binding domain of ABC-type galactofuranose YtfQ-like transport systems. Periplasmic binding domain of ABC-type YtfQ-like transport systems. The YtfQ protein from Escherichia coli is up-regulated under glucose-limited conditions and shares homology with a family of pentose/hexose sugar-binding proteins of the type 1 periplasmic binding protein superfamily. Members of this group are predicted to be involved in the transport of sugar-containing molecules across cellular and organellar membranes; however their ligand specificity is not determined experimentally.

CAZyme Hits help

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QFT90343.1	1.77e-237	13	433	1	420
AND40955.1	3.31e-237	13	433	1	419
QOK29448.1	3.15e-235	13	433	1	419
UAC48050.1	2.49e-234	13	433	1	418
QWC22086.1	8.88e-234	13	433	1	424

PDB Hits download full data without filtering help

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
4K05_A	1.42e-101	49	433	12	398	Crystalstructure of a DUF1343 family protein (BF0371) from Bacteroides fragilis NCTC 9343 at 1.65 A resolution [Bacteroides fragilis NCTC 9343],4K05_B Crystal structure of a DUF1343 family protein (BF0371) from Bacteroides fragilis NCTC 9343 at 1.65 A resolution [Bacteroides fragilis NCTC 9343]
4JJA_A	5.01e-65	52	433	8	368	Crystalstructure of a DUF1343 family protein (BF0379) from Bacteroides fragilis NCTC 9343 at 1.30 A resolution [Bacteroides fragilis NCTC 9343]

Swiss-Prot Hits download full data without filtering help

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
P40407	7.37e-189	13	433	1	414	Uncharacterized protein YbbC OS=Bacillus subtilis (strain 168) OX=224308 GN=ybbC PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000277	0.999089	0.000177	0.000155	0.000143	0.000131

TMHMM Annotations download full data without filtering help

start	end
12	34