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CAZyme Information: MGYG000001483_02409
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Arachnia massiliensis | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Actinobacteriota; Actinomycetia; Propionibacteriales; Propionibacteriaceae; Arachnia; Arachnia massiliensis | |||||||||||
| CAZyme ID | MGYG000001483_02409 | |||||||||||
| CAZy Family | CBM5 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 307445; End: 310267 Strand: - | |||||||||||
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| NF033681 | ExeM_NucH_DNase | 0.0 | 3 | 564 | 1 | 543 | ExeM/NucH family extracellular endonuclease. |
| COG2374 | COG2374 | 1.74e-125 | 2 | 564 | 218 | 786 | Predicted extracellular nuclease [General function prediction only]. |
| cd10283 | MnuA_DNase1-like | 9.55e-60 | 245 | 564 | 1 | 266 | Mycoplasma pulmonis MnuA nuclease-like. This subfamily includes Mycoplasma pulmonis MnuA, a membrane-associated nuclease related to Deoxyribonuclease 1 (DNase1 or DNase I, EC 3.1.21.1). The in vivo role of MnuA is as yet undetermined. This subfamily belongs to the large EEP (exonuclease/endonuclease/phosphatase) superfamily that contains functionally diverse enzymes that share a common catalytic mechanism of cleaving phosphodiester bonds. |
| NF033680 | exonuc_ExeM-GG | 1.62e-52 | 2 | 580 | 225 | 860 | extracellular exonuclease ExeM. ExeM, as described in Shewanella oneidensis, is a biofilm formation-associated exonuclease that cleaves extracellular DNA (eDNA), a biofilm component. Members of the ExeM family contain two or three pairs of Cys residues, presumed to form disulfide bonds, and a C-terminal GlyGly-CTERM membrane-anchoring segment. Strangely, engineered removal of the GlyGly-CTERM region did not result in net export from the cell and appearance of the enzyme in culture supernatants. |
| cd04486 | YhcR_OBF_like | 3.01e-18 | 2 | 75 | 1 | 70 | YhcR_OBF_like: A subfamily of OB-fold domains similar to the OB folds of Bacillus subtilis YhcR. YhcR is a sugar-nonspecific nuclease, which is active in the presence of Ca2+ and Mn2+. It cleaves RNA endonucleolytically, producing 3'-monophosphate nucleosides. YhcR appears to be the major Ca2+ activated nuclease of B. subtilis. YhcR may be localized in the cell wall. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| SDS92078.1 | 4.04e-152 | 3 | 600 | 260 | 873 |
| ANC31565.1 | 1.01e-147 | 1 | 577 | 258 | 850 |
| QAY64865.1 | 6.40e-142 | 1 | 575 | 265 | 856 |
| QAY71724.1 | 8.80e-140 | 1 | 575 | 256 | 849 |
| ACZ32093.1 | 1.37e-137 | 1 | 575 | 249 | 838 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 4M03_A | 4.93e-15 | 572 | 739 | 34 | 203 | ChainA, Serine-rich adhesin for platelets [Staphylococcus aureus subsp. aureus NCTC 8325] |
| 4M00_A | 2.65e-14 | 539 | 739 | 326 | 534 | ChainA, Serine-rich adhesin for platelets [Staphylococcus aureus subsp. aureus NCTC 8325] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| Q6GDE9 | 9.25e-14 | 539 | 739 | 536 | 744 | Serine-rich adhesin for platelets OS=Staphylococcus aureus (strain MRSA252) OX=282458 GN=sasA PE=3 SV=1 |
| Q6G620 | 1.37e-13 | 539 | 739 | 536 | 744 | Serine-rich adhesin for platelets OS=Staphylococcus aureus (strain MSSA476) OX=282459 GN=sraP PE=3 SV=1 |
| Q8NUJ3 | 1.37e-13 | 539 | 739 | 536 | 744 | Serine-rich adhesin for platelets OS=Staphylococcus aureus (strain MW2) OX=196620 GN=sraP PE=1 SV=1 |
| Q5HCP3 | 3.09e-13 | 539 | 739 | 536 | 744 | Serine-rich adhesin for platelets OS=Staphylococcus aureus (strain COL) OX=93062 GN=sraP PE=3 SV=1 |
| Q2FDK5 | 3.10e-13 | 539 | 739 | 536 | 744 | Serine-rich adhesin for platelets OS=Staphylococcus aureus (strain USA300) OX=367830 GN=sraP PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.984255 | 0.015671 | 0.000057 | 0.000021 | 0.000012 | 0.000020 |