CAZyme Information: MGYG000001484_02501

Basic Information

• Species: Nigerium massiliense
• Lineage: Bacteria; Actinobacteriota; Actinomycetia; Propionibacteriales; Propionibacteriaceae; Nigerium; Nigerium massiliense
• CAZyme ID: MGYG000001484_02501
• CAZy Family: CBM5
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
985	MGYG000001484_3|CGC10	101464.18	4.7189

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000001484	2934258	Isolate	not provided	not provided

• Gene Location: Start: 1278178; End: 1281135 Strand: -

Full Sequence      

MPPASTTRRAFAVLSAVACTAASLIAVAPTAHAAADHIVINEFYGRGGSANQPFANKFVE
LYNPTGADVALAGTSLQYRSATGTGNASGVAALTGTVKAGGYFLVQLGSNGTTGAALPAP
DQTATGINPSGTTGTVYLAKAATAINPDTTASVIDKLGYGTSNSPETAAAAYDGSNTTPG
SLNRANGADTDNNAADFSFSAPVTPQNSSSAGGPVDPDPTPTPEPGASKSIAEIQGTGSA
TPLAGQSVTTRGVITAAYPTGGFRGVYIQTPGSGGTAKTAGQASDGIFVFSDTLAAMPIG
TCIDVSGTATEYYDLTQLTNVTATPQTGCAAVKPTPLATLPATDADKEAYEGMLVQPEGT
YTITNNYQANQYGQIGLAVGTKPLYQATDVVAPGAAAAAYEAENVKKYITLDDGSSWNYL
TNKTAQDSPLPYLSATTPMRTASQVTFTKPVILDYRFQWNYQPTGQVVGSDSPNIPVASE
NDREATVPAVGGDVQLASFNVLNYFSDLGENESGCRAYADRNGNPVATNNCQVRGAYTAK
AFADQKAKIVSAINGTNAEVVSLMEIENSAGISYLPGQNRDKALADLVAGLNAAAGTTRW
AYVPSPTAVPTSEDVIRTAFIYDPSKVQPVGPSLIDVDTAFANARYPLAQKFSVTGSGTQ
FVVVANHFKSKGSGADDGTGQGLSNPSREAQARQLTSWVGQQFADEAVFLMGDFNSYSAE
TPVRIIESAGFTNLAKKFDEGSASYQFSGRLGSLDHAFANAKALALVTGASVWDINGDES
VAFQYSRRNYNVVDFYAPNAFASSDHDPVVVGVKAAAATSPVAVKATASDCNSFGFAVEG
TVPAGARLKVTWERDGQGQTTTVTNFPWWSGNNQAGWSNAKATLVAADGTVLATSGAPIN
PQSCPVISSYGVTKNAFGFKVTGAVPEGARLRITWTRSGQKQTTTVSAMNWWSGANQAGW
SGASAVLIDAKGDVVAKSALINPPA

Enzyme Prediction     

No EC number prediction in MGYG000001484_02501.

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
NF033681	ExeM_NucH_DNase	0.0	250	808	1	538	ExeM/NucH family extracellular endonuclease.
COG2374	COG2374	1.08e-145	39	808	27	781	Predicted extracellular nuclease [General function prediction only].
NF033680	exonuc_ExeM-GG	5.82e-57	48	808	34	838	extracellular exonuclease ExeM. ExeM, as described in Shewanella oneidensis, is a biofilm formation-associated exonuclease that cleaves extracellular DNA (eDNA), a biofilm component. Members of the ExeM family contain two or three pairs of Cys residues, presumed to form disulfide bonds, and a C-terminal GlyGly-CTERM membrane-anchoring segment. Strangely, engineered removal of the GlyGly-CTERM region did not result in net export from the cell and appearance of the enzyme in culture supernatants.
cd10283	MnuA_DNase1-like	2.12e-55	496	808	3	261	Mycoplasma pulmonis MnuA nuclease-like. This subfamily includes Mycoplasma pulmonis MnuA, a membrane-associated nuclease related to Deoxyribonuclease 1 (DNase1 or DNase I, EC 3.1.21.1). The in vivo role of MnuA is as yet undetermined. This subfamily belongs to the large EEP (exonuclease/endonuclease/phosphatase) superfamily that contains functionally diverse enzymes that share a common catalytic mechanism of cleaving phosphodiester bonds.
cd04486	YhcR_OBF_like	2.83e-17	249	323	1	71	YhcR_OBF_like: A subfamily of OB-fold domains similar to the OB folds of Bacillus subtilis YhcR. YhcR is a sugar-nonspecific nuclease, which is active in the presence of Ca2+ and Mn2+. It cleaves RNA endonucleolytically, producing 3'-monophosphate nucleosides. YhcR appears to be the major Ca2+ activated nuclease of B. subtilis. YhcR may be localized in the cell wall.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
SDS92078.1	8.81e-188	14	817	13	831
QAY71724.1	1.98e-175	38	822	40	849
ANC31565.1	2.47e-174	23	890	27	900
ACZ32093.1	4.74e-172	2	815	4	830
QAY64865.1	5.75e-170	12	834	15	866

PDB Hits     

has no PDB hit.

Swiss-Prot Hits     

has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.001335	0.970974	0.000696	0.026287	0.000403	0.000263

TMHMM  Annotations     

start	end
13	35