dbCAN-seq: a database of CAZyme sequence and annotation

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CAZyme Information: MGYG000001485_02863

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Species

Pseudomonas_E massiliensis

Lineage

Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas_E; Pseudomonas_E massiliensis

CAZyme ID

MGYG000001485_02863

CAZy Family

GH17

CAZyme Description

hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
517	MGYG000001485_7\|CGC9	57265.35	8.567

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000001485	4723534	Isolate	not provided	not provided

Gene Location

Start: 744436; End: 745989 Strand: -

No EC number prediction in MGYG000001485_02863.

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
COG5309	Scw11	3.99e-43	6	305	3	305	Exo-beta-1,3-glucanase, GH17 family [Carbohydrate transport and metabolism].
cd19608	GH113_mannanase-like	4.51e-04	139	274	126	272	Glycoside hydrolase family 113 beta-1,4-mannanase and similar proteins. Mannan endo-1,4-beta mannosidase (E.C 3.2.1.78) randomly cleaves (1->4)-beta-D-mannosidic linkages in mannans, galactomannans and glucomannans and is also called beta-1,4-mannanase, endo-1,4-beta-mannanase, endo-beta-1,4-mannase, beta-mannanase B, beta-1, 4-mannan 4-mannanohydrolase, endo-beta-mannanase, beta-D-mannanase, 1,4-beta-D-mannan mannanohydrolase, and 4-beta-D-mannan mannanohydrolase. (1->4)-beta-linked mannans are polysaccharides with a linear polymer backbone of (1->4)-beta-linked mannose units (in plants and fungi) or alternating mannose and glucose/galactose units (glucomannan in plants and fungi, and galactomannan and galactoglucomannan in plants), such as in the hemicellulose fraction of hard- and softwoods. Complete degradation of mannan requires a series of enzymes, including beta-1,4-mannanase. According to the CAZy database beta-1,4-mannanases are grouped into various glycoside hydrolase (GH) families; GH family 113 beta-1,4-mannanases include mostly bacterial and archaeal sequences.
pfam00332	Glyco_hydro_17	0.003	236	308	231	304	Glycosyl hydrolases family 17.

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QHG63784.1	1.26e-212	11	517	15	521
CRI55902.1	2.92e-211	10	517	4	511
AXQ49263.1	4.15e-211	6	513	9	516
QXI35944.1	1.68e-210	8	517	12	521
AMS18379.1	4.81e-209	22	517	22	517

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
4WTP_A	4.71e-19	72	308	55	289	Crystalstructure of glycoside hydrolase family 17 beta-1,3-glucanosyltransferase from Rhizomucor miehei [Rhizomucor miehei CAU432]
4WTR_A	2.87e-18	72	308	55	289	Active-sitemutant of Rhizomucor miehei beta-1,3-glucanosyltransferase in complex with laminaribiose [Rhizomucor miehei CAU432],4WTS_A Active-site mutant of Rhizomucor miehei beta-1,3-glucanosyltransferase in complex with laminaritriose [Rhizomucor miehei CAU432]
6FCG_A	6.54e-08	108	317	117	389	Crystalstructure of an endo-laminarinase from Formosa Hel1_33_131 [Formosa sp. Hel1_33_131],6FCG_B Crystal structure of an endo-laminarinase from Formosa Hel1_33_131 [Formosa sp. Hel1_33_131],6FCG_C Crystal structure of an endo-laminarinase from Formosa Hel1_33_131 [Formosa sp. Hel1_33_131],6FCG_D Crystal structure of an endo-laminarinase from Formosa Hel1_33_131 [Formosa sp. Hel1_33_131],6FCG_E Crystal structure of an endo-laminarinase from Formosa Hel1_33_131 [Formosa sp. Hel1_33_131],6FCG_F Crystal structure of an endo-laminarinase from Formosa Hel1_33_131 [Formosa sp. Hel1_33_131]

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
D4B2W4	1.99e-16	70	308	41	296	Glucan 1,3-beta-glucosidase ARB_02797 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) OX=663331 GN=ARB_02797 PE=1 SV=1
P15703	1.66e-10	73	303	47	300	Glucan 1,3-beta-glucosidase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=BGL2 PE=1 SV=1

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.965981	0.007287	0.025415	0.000070	0.000036	0.001224