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CAZyme Information: MGYG000001485_03330
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Pseudomonas_E massiliensis | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas_E; Pseudomonas_E massiliensis | |||||||||||
| CAZyme ID | MGYG000001485_03330 | |||||||||||
| CAZy Family | GH16 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 1264272; End: 1271315 Strand: - | |||||||||||
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| smart00736 | CADG | 1.30e-28 | 1431 | 1525 | 1 | 95 | Dystroglycan-type cadherin-like domains. Cadherin-homologous domains present in metazoan dystroglycans and alpha/epsilon sarcoglycans, yeast Axl2p and in a very large protein from magnetotactic bacteria. Likely to bind calcium ions. |
| smart00736 | CADG | 1.46e-28 | 1170 | 1266 | 1 | 97 | Dystroglycan-type cadherin-like domains. Cadherin-homologous domains present in metazoan dystroglycans and alpha/epsilon sarcoglycans, yeast Axl2p and in a very large protein from magnetotactic bacteria. Likely to bind calcium ions. |
| smart00736 | CADG | 1.62e-26 | 648 | 744 | 1 | 97 | Dystroglycan-type cadherin-like domains. Cadherin-homologous domains present in metazoan dystroglycans and alpha/epsilon sarcoglycans, yeast Axl2p and in a very large protein from magnetotactic bacteria. Likely to bind calcium ions. |
| smart00736 | CADG | 1.64e-25 | 546 | 640 | 1 | 95 | Dystroglycan-type cadherin-like domains. Cadherin-homologous domains present in metazoan dystroglycans and alpha/epsilon sarcoglycans, yeast Axl2p and in a very large protein from magnetotactic bacteria. Likely to bind calcium ions. |
| smart00736 | CADG | 2.44e-25 | 909 | 1005 | 1 | 97 | Dystroglycan-type cadherin-like domains. Cadherin-homologous domains present in metazoan dystroglycans and alpha/epsilon sarcoglycans, yeast Axl2p and in a very large protein from magnetotactic bacteria. Likely to bind calcium ions. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QXI50735.1 | 0.0 | 1 | 2347 | 1 | 1870 |
| QXH92242.1 | 0.0 | 1 | 2347 | 1 | 1870 |
| QZP31465.1 | 0.0 | 1 | 2347 | 1 | 1872 |
| BBH33679.1 | 0.0 | 1 | 2347 | 1 | 1870 |
| BBP53225.1 | 0.0 | 1 | 2325 | 1 | 1848 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 5LW3_A | 3.43e-109 | 1 | 378 | 1 | 376 | Azotobactervinelandii Mannuronan C-5 epimerase AlgE6 A-module [Azotobacter vinelandii] |
| 2PYG_A | 1.57e-108 | 1 | 379 | 1 | 377 | Azotobactervinelandii Mannuronan C-5 epimerase AlgE4 A-module [Azotobacter vinelandii],2PYG_B Azotobacter vinelandii Mannuronan C-5 epimerase AlgE4 A-module [Azotobacter vinelandii],2PYH_A Azotobacter vinelandii Mannuronan C-5 epimerase AlgE4 A-module complexed with mannuronan trisaccharide [Azotobacter vinelandii],2PYH_B Azotobacter vinelandii Mannuronan C-5 epimerase AlgE4 A-module complexed with mannuronan trisaccharide [Azotobacter vinelandii] |
| 2AGM_A | 8.56e-23 | 437 | 536 | 51 | 147 | Solutionstructure of the R-module from AlgE4 [Azotobacter vinelandii] |
| 2ML1_A | 3.45e-17 | 443 | 538 | 60 | 152 | SolutionStructure of AlgE6R1 subunit from the Azotobacter vinelandii Mannuronan C5-epimerase [Azotobacter vinelandii] |
| 2ML2_A | 1.47e-16 | 437 | 539 | 62 | 161 | SolutionStructure of AlgE6R2 subunit from the Azotobacter vinelandii Mannuronan C5-epimerase [Azotobacter vinelandii] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| Q44492 | 2.33e-152 | 1 | 1169 | 1 | 986 | Mannuronan C5-epimerase AlgE5 OS=Azotobacter vinelandii OX=354 GN=algE5 PE=2 SV=1 |
| Q44495 | 5.51e-149 | 1 | 1169 | 1 | 986 | Mannuronan C5-epimerase AlgE2 OS=Azotobacter vinelandii OX=354 GN=algE2 PE=1 SV=1 |
| Q44496 | 8.59e-142 | 1 | 1687 | 1 | 1535 | Mannuronan C5-epimerase AlgE3 OS=Azotobacter vinelandii OX=354 GN=algE3 PE=3 SV=1 |
| Q44494 | 8.65e-134 | 1 | 896 | 1 | 842 | Mannuronan C5-epimerase AlgE1 OS=Azotobacter vinelandii OX=354 GN=algE1 PE=1 SV=1 |
| Q9ZFH0 | 5.54e-133 | 1 | 899 | 1 | 852 | Mannuronan C5-epimerase AlgE6 OS=Azotobacter vinelandii OX=354 GN=algE6 PE=1 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 1.000062 | 0.000002 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |