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CAZyme Information: MGYG000001485_03824

You are here: Home > Sequence: MGYG000001485_03824

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Pseudomonas_E massiliensis
Lineage Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas_E; Pseudomonas_E massiliensis
CAZyme ID MGYG000001485_03824
CAZy Family GH15
CAZyme Description Trehalase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
607 69046.58 6.9321
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001485 4723534 Isolate not provided not provided
Gene Location Start: 1819808;  End: 1821631  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001485_03824.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH15 226 591 1.9e-77 0.9916897506925207

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG3387 SGA1 7.70e-122 11 602 15 612
Glucoamylase (glucan-1,4-alpha-glucosidase), GH15 family [Carbohydrate transport and metabolism].
pfam00723 Glyco_hydro_15 9.15e-64 223 591 1 416
Glycosyl hydrolases family 15. In higher organisms this family is represented by phosphorylase kinase subunits.
TIGR01577 oligosac_amyl 2.20e-14 202 570 223 588
oligosaccharide amylase. The name of this type of amylase is based on the characterization of an glucoamylase family enzyme from Thermoactinomyces vulgaris. The T. vulgaris enzyme was expressed in E. coli and, like other glucoamylases, it releases beta-D-glucose from starch. However, unlike previously characterized glucoamylases, this T. vulgaris amylase hydrolyzes maltooligosaccharides (maltotetraose, maltose) more efficiently than starch (1), indicating this enzyme belongs to a class of glucoamylase-type enzymes with oligosaccharide-metabolizing activity.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AEF23101.1 0.0 4 607 3 603
QKZ05502.1 1.51e-315 1 607 1 607
QQD57620.1 5.98e-306 1 607 1 608
QJI39070.1 1.71e-305 1 607 1 608
AUO24529.1 3.44e-305 1 607 1 608

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q10211 9.88e-139 12 599 19 644
Uncharacterized protein C4H3.03c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAC4H3.03c PE=4 SV=1
P71741 2.36e-125 11 607 53 675
Trehalase OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) OX=83332 GN=Rv2402 PE=1 SV=2
A0R0W9 4.07e-123 11 596 41 650
Trehalase OS=Mycolicibacterium smegmatis (strain ATCC 700084 / mc(2)155) OX=246196 GN=MSMEG_4535 PE=1 SV=1
Q9HLE2 3.52e-102 26 595 2 569
Trehalase OS=Thermoplasma acidophilum (strain ATCC 25905 / DSM 1728 / JCM 9062 / NBRC 15155 / AMRC-C165) OX=273075 GN=Ta0286 PE=1 SV=1
Q978S7 7.75e-102 12 598 30 614
Trehalase OS=Thermoplasma volcanium (strain ATCC 51530 / DSM 4299 / JCM 9571 / NBRC 15438 / GSS1) OX=273116 GN=TVG1381191 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000059 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001485_03824.