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CAZyme Information: MGYG000001489_04399

You are here: Home > Sequence: MGYG000001489_04399

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Parabacteroides goldsteinii
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Tannerellaceae; Parabacteroides; Parabacteroides goldsteinii
CAZyme ID MGYG000001489_04399
CAZy Family GH106
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1221 MGYG000001489_2|CGC29 138713.89 6.8252
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001489 6453137 Isolate not provided not provided
Gene Location Start: 2096349;  End: 2100014  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001489_04399.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH106 48 740 4.6e-78 0.7851941747572816

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam17132 Glyco_hydro_106 1.69e-32 209 703 355 866
alpha-L-rhamnosidase.
pfam02837 Glyco_hydro_2_N 4.20e-04 1104 1178 58 134
Glycosyl hydrolases family 2, sugar binding domain. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities and has a jelly-roll fold. The domain binds the sugar moiety during the sugar-hydrolysis reaction.
cd03143 A4_beta-galactosidase_middle_domain 4.60e-04 551 650 52 148
A4 beta-galactosidase middle domain: a type 1 glutamine amidotransferase (GATase1)-like domain. A4 beta-galactosidase middle domain: a type 1 glutamine amidotransferase (GATase1)-like domain. This group includes proteins similar to beta-galactosidase from Thermus thermophilus. Beta-Galactosidase hydrolyzes the beta-1,4-D-galactosidic linkage of lactose, as well as those of related chromogens, o-nitrophenyl-beta-D-galactopyranoside (ONP-Gal) and 5-bromo-4-chloro-3-indolyl-beta-D-galactoside (X-gal). This A4 beta-galactosidase middle domain lacks the catalytic triad of typical GATase1 domains. The reactive Cys residue found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow in typical GATase1 domains is not conserved in this group.
PRK10340 ebgA 0.001 1115 1178 113 178
cryptic beta-D-galactosidase subunit alpha; Reviewed
PRK10150 PRK10150 0.002 1105 1189 59 144
beta-D-glucuronidase; Provisional

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
BBK92466.1 0.0 29 1210 6 1176
QJE29214.1 0.0 29 1210 20 1190
QKH99948.1 0.0 29 1210 6 1176
SCM59192.1 0.0 31 1210 19 1179
BBD46328.1 0.0 12 1210 9 1192

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6Q2F_A 4.07e-06 1095 1206 1011 1138
Structureof Rhamnosidase from Novosphingobium sp. PP1Y [Novosphingobium sp. PP1Y]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
T2KNA8 5.55e-18 43 1183 28 1093
Putative beta-glucuronidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22040 PE=2 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000586 0.998692 0.000223 0.000167 0.000146 0.000144

TMHMM  Annotations      download full data without filtering help

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