logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000001490_00300

You are here: Home > Sequence: MGYG000001490_00300

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Bifidobacterium catenulatum
Lineage Bacteria; Actinobacteriota; Actinomycetia; Actinomycetales; Bifidobacteriaceae; Bifidobacterium; Bifidobacterium catenulatum
CAZyme ID MGYG000001490_00300
CAZy Family GH8
CAZyme Description Reducing end xylose-releasing exo-oligoxylanase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
379 MGYG000001490_1|CGC4 43789.41 4.6078
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001490 2079525 Isolate not provided not provided
Gene Location Start: 373865;  End: 375004  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.156 3.2.1.8

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH8 54 371 2.5e-75 0.9375

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG3405 BcsZ 3.48e-65 52 378 40 350
Endo-1,4-beta-D-glucanase Y [Carbohydrate transport and metabolism].
pfam01270 Glyco_hydro_8 2.00e-13 55 297 22 254
Glycosyl hydrolases family 8.
PRK11097 PRK11097 1.52e-06 55 158 42 146
cellulase.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
BAR01257.1 3.36e-300 1 379 1 379
AVT44761.1 1.60e-298 1 379 1 379
BAR02996.1 4.59e-298 1 379 1 379
BAF39081.1 4.59e-298 1 379 1 379
AAO67498.1 4.59e-298 1 379 1 379

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1WU4_A 2.05e-141 14 377 16 377
ChainA, xylanase Y [Halalkalibacterium halodurans C-125],1WU5_A Chain A, xylanase Y [Halalkalibacterium halodurans C-125]
3A3V_A 8.26e-141 14 377 16 377
ChainA, Xylanase Y [Halalkalibacterium halodurans]
2DRR_A 1.17e-140 14 377 16 377
ChainA, Xylanase Y [Halalkalibacterium halodurans C-125]
2DRS_A 1.66e-140 14 377 16 377
ChainA, Xylanase Y [Halalkalibacterium halodurans C-125]
1WU6_A 1.66e-140 14 377 16 377
ChainA, xylanase Y [Halalkalibacterium halodurans C-125]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
A1A048 9.18e-299 1 379 1 379
Reducing end xylose-releasing exo-oligoxylanase OS=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) OX=367928 GN=xylA PE=1 SV=1
Q9KB30 8.53e-141 14 377 16 377
Reducing end xylose-releasing exo-oligoxylanase OS=Alkalihalobacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125) OX=272558 GN=BH2105 PE=1 SV=1
A0A0S2UQQ5 1.85e-125 14 377 16 378
Reducing-end xylose-releasing exo-oligoxylanase Rex8A OS=Paenibacillus barcinonensis OX=198119 GN=rex8A PE=1 SV=1
P37701 7.07e-12 60 376 93 389
Endoglucanase 2 OS=Ruminiclostridium josui OX=1499 GN=celB PE=3 SV=1
A3DC29 2.28e-09 60 309 89 330
Endoglucanase A OS=Acetivibrio thermocellus (strain ATCC 27405 / DSM 1237 / JCM 9322 / NBRC 103400 / NCIMB 10682 / NRRL B-4536 / VPI 7372) OX=203119 GN=celA PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000047 0.000001 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001490_00300.