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CAZyme Information: MGYG000001493_01436
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Enterocloster bolteae | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Enterocloster; Enterocloster bolteae | |||||||||||
| CAZyme ID | MGYG000001493_01436 | |||||||||||
| CAZy Family | GH105 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 1598854; End: 1601298 Strand: - | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH105 | 19 | 359 | 6.9e-95 | 0.9668674698795181 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| NF033504 | Ni_dep_LarA | 0.0 | 390 | 801 | 1 | 417 | nickel-dependent lactate racemase. LarA from Lactobacillus plantarum is a nickel-dependent lactate racemase and the founding member of a family of isomerases that depend on a nicotinic acid-derived nickel pincer cofactor. While it is not yet clear which homologs of LarA act preferentially on lactate, this model identifies one clade of architecurally similar proteins from among a broader set of LarA homologs. Note that the crystal structure 4NAR, on deposit at PDB but not associated with any publication, represents a protein from Thermotoga maritima that falls outside the scope of this family and that is annotated in PDB as a putative uronate isomerase. |
| COG3875 | LarA | 1.61e-109 | 389 | 800 | 14 | 421 | Nickel-dependent lactate racemase [Cell wall/membrane/envelope biogenesis]. |
| COG4225 | YesR | 1.09e-78 | 1 | 359 | 6 | 354 | Rhamnogalacturonyl hydrolase YesR [Carbohydrate transport and metabolism]. |
| pfam09861 | DUF2088 | 1.55e-73 | 394 | 587 | 1 | 197 | Domain of unknown function (DUF2088). This domain, found in various hypothetical prokaryotic proteins, has no known function. |
| pfam07470 | Glyco_hydro_88 | 5.55e-70 | 22 | 355 | 27 | 336 | Glycosyl Hydrolase Family 88. Unsaturated glucuronyl hydrolase catalyzes the hydrolytic release of unsaturated glucuronic acids from oligosaccharides (EC:3.2.1.-) produced by the reactions of polysaccharide lyases. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| ASN96698.1 | 0.0 | 1 | 814 | 1 | 814 |
| QRP38506.1 | 0.0 | 1 | 814 | 1 | 814 |
| QJU19057.1 | 0.0 | 1 | 814 | 1 | 814 |
| QTQ15312.1 | 7.40e-119 | 1 | 358 | 1 | 356 |
| QTQ12711.1 | 4.48e-117 | 1 | 358 | 1 | 356 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 6D6Z_A | 8.38e-114 | 388 | 801 | 4 | 415 | Structureof the 2nd lactate racemase homolog apoprotein from Thermoanaerobacterium thermosaccharolyticum [Thermoanaerobacterium thermosaccharolyticum DSM 571],7S91_A Chain A, Malate racemase Mar2 [Thermoanaerobacterium thermosaccharolyticum DSM 571] |
| 4WU0_A | 1.48e-82 | 22 | 359 | 23 | 359 | StructuralAnalysis of C. acetobutylicum ATCC 824 Glycoside Hydrolase From Family 105 [Clostridium acetobutylicum ATCC 824],4WU0_B Structural Analysis of C. acetobutylicum ATCC 824 Glycoside Hydrolase From Family 105 [Clostridium acetobutylicum ATCC 824] |
| 2YJG_A | 3.04e-70 | 390 | 798 | 4 | 422 | Structureof the lactate racemase apoprotein from Thermoanaerobacterium thermosaccharolyticum [Thermoanaerobacterium thermosaccharolyticum DSM 571],2YJG_B Structure of the lactate racemase apoprotein from Thermoanaerobacterium thermosaccharolyticum [Thermoanaerobacterium thermosaccharolyticum DSM 571] |
| 5HUQ_A | 2.29e-61 | 408 | 794 | 27 | 418 | Atethered niacin-derived pincer complex with a nickel-carbon bond in lactate racemase [Lactiplantibacillus plantarum],5HUQ_B A tethered niacin-derived pincer complex with a nickel-carbon bond in lactate racemase [Lactiplantibacillus plantarum] |
| 6C1W_A | 2.29e-61 | 408 | 794 | 27 | 418 | ChainA, Lactate racemase [Lactiplantibacillus plantarum WCFS1],6C1W_B Chain B, Lactate racemase [Lactiplantibacillus plantarum WCFS1],6C1W_C Chain C, Lactate racemase [Lactiplantibacillus plantarum WCFS1] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| D9TQ02 | 1.27e-69 | 390 | 798 | 4 | 422 | Lactate racemase OS=Thermoanaerobacterium thermosaccharolyticum (strain ATCC 7956 / DSM 571 / NCIMB 9385 / NCA 3814 / NCTC 13789 / WDCM 00135 / 2032) OX=580327 GN=larA PE=1 SV=1 |
| F9USS9 | 9.99e-61 | 408 | 794 | 27 | 418 | Lactate racemase OS=Lactiplantibacillus plantarum (strain ATCC BAA-793 / NCIMB 8826 / WCFS1) OX=220668 GN=larA PE=1 SV=1 |
| O34559 | 3.58e-54 | 22 | 364 | 39 | 370 | Unsaturated rhamnogalacturonyl hydrolase YteR OS=Bacillus subtilis (strain 168) OX=224308 GN=yteR PE=1 SV=1 |
| P0A3U6 | 2.21e-34 | 133 | 357 | 1 | 227 | Protein Atu3128 OS=Agrobacterium fabrum (strain C58 / ATCC 33970) OX=176299 GN=Atu3128 PE=3 SV=1 |
| P0A3U7 | 2.21e-34 | 133 | 357 | 1 | 227 | 24.9 kDa protein in picA locus OS=Rhizobium radiobacter OX=358 PE=2 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 1.000041 | 0.000000 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |