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CAZyme Information: MGYG000001500_03226

You are here: Home > Sequence: MGYG000001500_03226

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Lawsonibacter asaccharolyticus
Lineage Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Oscillospiraceae; Lawsonibacter; Lawsonibacter asaccharolyticus
CAZyme ID MGYG000001500_03226
CAZy Family GH23
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1992 MGYG000001500_10|CGC8 224307.76 4.722
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001500 3446570 Isolate not provided not provided
Gene Location Start: 3106411;  End: 3112389  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001500_03226.

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG4646 COG4646 7.59e-78 681 1210 1 540
Adenine-specific DNA methylase, N12 class [Replication, recombination and repair].
COG4646 COG4646 6.25e-28 1340 1542 427 637
Adenine-specific DNA methylase, N12 class [Replication, recombination and repair].
smart00487 DEXDc 3.23e-12 1154 1257 7 110
DEAD-like helicases superfamily.
cd18011 DEXDc_RapA 5.34e-10 1156 1410 1 179
DEXH-box helicase domain of RapA. In bacteria, RapA is an RNA polymerase (RNAP)-associated SWI2/SNF2 (switch/sucrose non-fermentable) protein that mediates RNAP recycling during transcription. The ATPase activity of RapA is stimulated by its interaction with RNAP and inhibited by its N-terminal domain. The conformational changes of RapA and its interaction with RNAP are essential for RNAP recycling. RapA is part of the DEAD-like helicase superfamily, a diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.
cd17919 DEXHc_Snf 4.51e-08 1156 1411 1 175
DEXH/Q-box helicase domain of DEAD-like helicase Snf family proteins. Sucrose Non-Fermenting (SNF) proteins DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ASV45029.1 0.0 383 1898 1545 3142
QIW86704.1 0.0 383 1915 1613 3234
QIW86628.1 0.0 383 1915 1613 3234
AEY69616.1 0.0 386 1943 1689 3330
AXF51455.1 0.0 386 1943 1782 3423

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q71TF8 5.50e-45 394 1754 40 1609
Defense against restriction protein B OS=Escherichia phage P1 OX=2886926 GN=darB PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000050 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001500_03226.