CAZyme Information: MGYG000001500_03299

Basic Information

• Species: Lawsonibacter asaccharolyticus
• Lineage: Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Oscillospiraceae; Lawsonibacter; Lawsonibacter asaccharolyticus
• CAZyme ID: MGYG000001500_03299
• CAZy Family: CBM54
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
1645		177960.43	4.2753

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000001500	3446570	Isolate	not provided	not provided

• Gene Location: Start: 3186050; End: 3190987 Strand: -

Full Sequence      

MKRWKEFRFEYLRTAAVFLLLCAMACTLIWALPAQVHADYTEPYMKRMEELGLLQGDADG
DLRPGDPITRAEFVTIINRAFGYQSAGGHPFRDVPGTAWYAEDVDIGYTEGYITGTSPTA
FSPNLSITREEAAFILAKNLMMEPAVGENTSFADGRSISTWSRGMVSAAAENNLISGYPD
GTFRPQKSITRGEAAVILLNAVGTPVSRPGTTTLGDVWGNVTITSSGVTLKDTVVAGNLY
VTAGVELGDVVLENVKVLGEIVVSGGGVSEAGEDSVILRNVDAPKLVVDNIKNQQVSLRV
EGDGLIQQASVRTDAFLADNTPAGHGIEEIELNGENGLELKLAGNIKNVVNRTPESALSI
SSGRVDTITVDEKAVDSTLEISSGAEADHVNLDVGTTVTGDGDIGDLVVNAPGSNVSMLP
DQIVIRPGDTANIDGENMDSEAAAESSADPRLLSGYPKITDLAPSSATAQFSGNKRGTVY
WAVTSVTDGSVGTDELIDPPSYTTKIVANGSAALSGAGERSTAKISKLVSDGSYYLSAVL
VDARGDQSPLKVLSFTTPDNTVPGFADGYPYMSKVTNVSAQVTVMATKSCRLYWALLPKG
AQAPTAQDFKANAVTGNLGYGSRDVTKNTAYSFDVNNVALEELESYDLYLWLTDVEGGQS
SRVEKLSFTTVDRTPPKFNTNATVNKVERTTVGLYANLNEAGTLYWVVVEQGTEYPKPLA
GQSGPVDLSSDTAKMQVSAGMNALKSGKVNMSQDKDVSFNVSGLDPEKAYDLYYVAQDKA
GNYSARVQVITIHTLDPSAPTVVQEFTRYNGDESGTPYPDTDIRLVFSEEVQDAAANVTL
KEYYDRVTAAKGETEKEQARTALGNVLRNSIKLYVDTGSGRPELVADGVDAADKTQGGWV
IDYRYAEVTMEEGKTVVIFRTADSEKESALNLQSGAEYHFEIEANTISDTSDAKNIMGKT
KLDTFKTIFAVVNLSNPNESTLEGTITDYHDPGQEIQLTGDDKLVDISWLLAPATTESVP
DNVDWDMIIWSDTSIAFDLYRRTNLAETPGKWERIGEEIELTVPDGDDRRGVSLTRILQK
GNNPQFQQLNQLLEENQYEYAVHFTRVGTLGDRDTWSQRVTMGVTVVAGSTSDLGSLANG
RLDSSALEEALAEGVTNIGQPDDFTLRKQFSDQTPPIFVDNRPNFETGDSSVKMYLMLDR
PGTIYYMVAPYGTVTTEGEERDGSKKYHFSTDKTDYEALPKNGENDPGSGGMEYPFNITA
PTPLSIINAGNQANARIKHGSIQGGATEVEKIVQDLEVKTDYIAYFVIQGSSSQVYSEVY
AYRFSTDDVTPAYITMRAVNPEVEFTTSQDATLYYSLFASNKLPPLFGQNLAGNHLDPEY
RDKVGTEITDLTLLEAIQKTINGVTGESYFDRYASEETKEQVRQAITSQTSSEALDKGSI
PNMAQKEPQAHDFTNAMDPESATAYVCLATAQNALGGKWTFKAVDGVRIPDEDAPVLLKV
TTTVTKVNDAADPVRVSGTVTLQFSETIYHINDSGNPDTLRAIIQRDVDKQKEVGFLNLV
NQSQSNLKYSKESGNTTNTITLDFWDAPVGATFSFCNTGHLADASANSRQNDSYTLELQP
TEGIGLITGGTTYRFVVTQGNYPGN

Enzyme Prediction     

No EC number prediction in MGYG000001500_03299.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
CBM54	200	315	3.3e-23	0.956140350877193

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam00395	SLH	2.13e-10	152	194	1	42	S-layer homology domain.
NF033190	inl_like_NEAT_1	5.27e-08	40	202	590	752	NEAT domain-containing leucine-rich repeat protein. Members of this family have an N-terminal NEAT (near transporter) domain often associated with iron transport, followed by a leucine-rich repeat region with significant sequence similarity to the internalins of Listeria monocytogenes. However, since Bacillus cereus (from which this protein was described, in PMID:16978259) is not considered an intracellular pathogen, and the function may be iron transport rather than internalization, applying the name "internalin" to this family probably would be misleading.
pfam00395	SLH	2.68e-07	91	132	1	42	S-layer homology domain.
NF033190	inl_like_NEAT_1	3.39e-07	91	198	582	687	NEAT domain-containing leucine-rich repeat protein. Members of this family have an N-terminal NEAT (near transporter) domain often associated with iron transport, followed by a leucine-rich repeat region with significant sequence similarity to the internalins of Listeria monocytogenes. However, since Bacillus cereus (from which this protein was described, in PMID:16978259) is not considered an intracellular pathogen, and the function may be iron transport rather than internalization, applying the name "internalin" to this family probably would be misleading.
pfam00395	SLH	1.55e-04	37	73	7	42	S-layer homology domain.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QQR07714.1	0.0	1	1645	2	1621
QIA32369.1	0.0	1	1645	2	1621
BCK84769.1	0.0	31	1641	36	1640
QQR30851.1	5.42e-236	32	1442	31	1586
ASB41592.1	5.42e-236	32	1442	31	1586

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
5GZT_A	8.18e-07	191	267	33	106	CrystalStructure of Chitinase ChiW from Paenibacillus sp. str. FPU-7 Reveals a Novel Type of Bacterial Cell-Surface-Expressed Multi-Modular Enzyme Machinery [Paenibacillus sp. FPU-7]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
P38537	6.47e-18	38	202	40	206	Surface-layer 125 kDa protein OS=Lysinibacillus sphaericus OX=1421 PE=3 SV=1
P19424	1.95e-14	39	198	48	210	Endoglucanase OS=Bacillus sp. (strain KSM-635) OX=1415 PE=1 SV=1
Q06852	2.58e-12	49	202	2099	2264	Cell surface glycoprotein 1 OS=Acetivibrio thermocellus (strain ATCC 27405 / DSM 1237 / JCM 9322 / NBRC 103400 / NCIMB 10682 / NRRL B-4536 / VPI 7372) OX=203119 GN=olpB PE=3 SV=2
P06546	1.39e-11	42	202	40	190	Middle cell wall protein OS=Brevibacillus brevis (strain 47 / JCM 6285 / NBRC 100599) OX=358681 GN=BBR47_54160 PE=4 SV=4
C6CRV0	2.66e-11	48	198	1299	1455	Endo-1,4-beta-xylanase A OS=Paenibacillus sp. (strain JDR-2) OX=324057 GN=xynA1 PE=1 SV=1

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.095256	0.483446	0.417563	0.001323	0.000892	0.001497

TMHMM  Annotations     

start	end
12	34