CAZyme Information: MGYG000001503_00191

Basic Information

• Species: Fermentimonas caenicola
• Lineage: Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Dysgonomonadaceae; Fermentimonas; Fermentimonas caenicola
• CAZyme ID: MGYG000001503_00191
• CAZy Family: GH3
• CAZyme Description: Beta-hexosaminidase

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
991		109991.16	8.2405

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000001503	2824716	Isolate	not provided	not provided

• Gene Location: Start: 225653; End: 228628 Strand: -

Full Sequence      

MTKRTALLFIISLCTFITSAQVTTNLYKQSDQKAVDHWVDSVYSTMSLDEKIGQLFMPIV
ESRNDWKPRIAGYIQNQKVGGLLFSKGTLSQQASITNYAQELSKVPLFISLDGEWGLSMR
IQDAPSFPRNMIIGAIQDEKIVELYGSEVARQCKEMGIHINFAPVIDVHSNPANPIIGNR
SFGENPDNVSRKGIAYAMGLESNGVISVAKHFPGHGDTSEDSHKTLPVITHNKARIEQFE
LYPFRKYINAGLSGIMTGHLDVPALNTKGLPASLSPEVGIKLLKEEMGYTGLTFTDGMAM
KGVSTQNEASVKAILAGNDIILGVINQKNEFESVKKAVEEGRIPTSMLEEKVRKILTYKF
IAGAHKFTPINTSHVRNAVNSSQAEWTQRKIYDGAVTLLKNNNNLVPITELHKRNIASVT
IGAPASNTFQKYLKKYGEVTSYQVQSPADATKIIDLNKHNLIIISIHSDKISDIASLQIP
TSSKQIIFVLFTSPYNLSKFSSATDKANAVIVAYDNSEFAQMSVAQGIFGGIRMTGKLPV
SSGNFKEGTGIDTEKIRLSYSLPEEVGLKSELFDNIENIALEGIRQRAYPGCQILVAKDG
VIIYEREFGKLSYGESPDVTSETVYDLASVTKASATLPAVMKLYDEKKLALQDNLGKFVK
ETKGSNKENIRIRSLLLHETGIVSFIPYYVTAIDKNSYTGSLFGSRSNTFHAHYAGAWGR
TDYKFYPDMISSKASDEFYMPVAENMYASDKMHSALLKEVIDTPLQRVGQYRYSCLNFML
LKETVENISGVDLNNFVQNNFYDKLGSVSTTFQPLKYMSADIIAPTENDPFFRKQHLRGY
VHDEGAALFGGISGNAGLFSNANDLAKLYQMWLNKGEYGGERFLSKETVELFTTAKSSIS
RRGMGFDKPDPRNSKANPTSPGTPIEVYGHTGFTGTCFWVDPTNNMIYIFLSNRVNPARS
PDRLSSLEIRERIQEELYQALDNKKNSEISK

Enzyme Prediction     

EC	3.2.1.-

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH3	101	322	2e-56	0.9722222222222222

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
COG1472	BglX	3.59e-74	46	432	1	371	Periplasmic beta-glucosidase and related glycosidases [Carbohydrate transport and metabolism].
pfam00933	Glyco_hydro_3	8.42e-71	47	357	1	315	Glycosyl hydrolase family 3 N terminal domain.
PRK03642	PRK03642	1.01e-46	558	966	25	412	putative periplasmic esterase; Provisional
COG1680	AmpC	2.25e-35	561	977	26	386	CubicO group peptidase, beta-lactamase class C family [Defense mechanisms].
PRK05337	PRK05337	4.52e-32	79	327	26	282	beta-hexosaminidase; Provisional

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
CEA16485.1	0.0	1	991	1	991
SCD21261.1	0.0	1	981	5	984
BBD45751.1	0.0	3	982	4	984
QRX64983.1	0.0	20	981	16	977
SCM58342.1	0.0	4	981	5	983

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
3BMX_A	9.63e-63	30	407	28	446	Beta-N-hexosaminidase(YbbD) from Bacillus subtilis [Bacillus subtilis],3BMX_B Beta-N-hexosaminidase (YbbD) from Bacillus subtilis [Bacillus subtilis],3NVD_A Structure of YBBD in complex with pugnac [Bacillus subtilis],3NVD_B Structure of YBBD in complex with pugnac [Bacillus subtilis]
3LK6_A	2.77e-62	30	407	2	420	ChainA, Lipoprotein ybbD [Bacillus subtilis],3LK6_B Chain B, Lipoprotein ybbD [Bacillus subtilis],3LK6_C Chain C, Lipoprotein ybbD [Bacillus subtilis],3LK6_D Chain D, Lipoprotein ybbD [Bacillus subtilis]
4GYJ_A	5.07e-62	30	407	32	450	Crystalstructure of mutant (D318N) bacillus subtilis family 3 glycoside hydrolase (nagz) in complex with glcnac-murnac (space group P1) [Bacillus subtilis subsp. subtilis str. 168],4GYJ_B Crystal structure of mutant (D318N) bacillus subtilis family 3 glycoside hydrolase (nagz) in complex with glcnac-murnac (space group P1) [Bacillus subtilis subsp. subtilis str. 168],4GYK_A Crystal structure of mutant (D318N) bacillus subtilis family 3 glycoside hydrolase (nagz) in complex with glcnac-murnac (space group P1211) [Bacillus subtilis subsp. subtilis str. 168],4GYK_B Crystal structure of mutant (D318N) bacillus subtilis family 3 glycoside hydrolase (nagz) in complex with glcnac-murnac (space group P1211) [Bacillus subtilis subsp. subtilis str. 168]
6K5J_A	3.81e-58	46	539	11	528	Structureof a glycoside hydrolase family 3 beta-N-acetylglucosaminidase from Paenibacillus sp. str. FPU-7 [Paenibacillaceae]
4ZM6_A	2.63e-48	47	544	8	529	Aunique GCN5-related glucosamine N-acetyltransferase region exist in the fungal multi-domain GH3 beta-N-acetylglucosaminidase [Rhizomucor miehei CAU432],4ZM6_B A unique GCN5-related glucosamine N-acetyltransferase region exist in the fungal multi-domain GH3 beta-N-acetylglucosaminidase [Rhizomucor miehei CAU432]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
P40406	5.28e-62	30	407	28	446	Beta-hexosaminidase OS=Bacillus subtilis (strain 168) OX=224308 GN=nagZ PE=1 SV=1
P48823	1.43e-45	68	359	53	380	Beta-hexosaminidase A OS=Pseudoalteromonas piscicida OX=43662 GN=cht60 PE=1 SV=1
Q7WUL3	2.64e-42	38	409	18	399	Beta-N-acetylglucosaminidase/beta-glucosidase OS=Cellulomonas fimi OX=1708 GN=nag3 PE=1 SV=1
Q8XBJ0	2.49e-38	558	966	25	412	Putative D-alanyl-D-alanine carboxypeptidase OS=Escherichia coli O157:H7 OX=83334 GN=yfeW PE=3 SV=1
P77619	8.28e-38	558	966	25	412	Putative D-alanyl-D-alanine carboxypeptidase OS=Escherichia coli (strain K12) OX=83333 GN=yfeW PE=1 SV=2

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000357	0.998792	0.000360	0.000161	0.000151	0.000139

TMHMM  Annotations     

There is no transmembrane helices in MGYG000001503_00191.