You are browsing environment: HUMAN GUT
CAZyme Information: MGYG000001503_01713
You are here: Home > Sequence: MGYG000001503_01713
Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Fermentimonas caenicola | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Dysgonomonadaceae; Fermentimonas; Fermentimonas caenicola | |||||||||||
| CAZyme ID | MGYG000001503_01713 | |||||||||||
| CAZy Family | CBM50 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
|
|||||||||||
| Genome Property |
|
|||||||||||
| Gene Location | Start: 878189; End: 879082 Strand: + | |||||||||||
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| pfam00877 | NLPC_P60 | 1.03e-30 | 56 | 168 | 1 | 105 | NlpC/P60 family. The function of this domain is unknown. It is found in several lipoproteins. |
| PRK10838 | spr | 1.16e-23 | 10 | 174 | 9 | 189 | bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase. |
| COG0791 | Spr | 1.86e-19 | 31 | 168 | 62 | 197 | Cell wall-associated hydrolase, NlpC family [Cell wall/membrane/envelope biogenesis]. |
| PRK13914 | PRK13914 | 1.66e-17 | 30 | 128 | 356 | 446 | invasion associated endopeptidase. |
| cd00118 | LysM | 2.00e-14 | 250 | 292 | 2 | 45 | Lysin Motif is a small domain involved in binding peptidoglycan. LysM, a small globular domain with approximately 40 amino acids, is a widespread protein module involved in binding peptidoglycan in bacteria and chitin in eukaryotes. The domain was originally identified in enzymes that degrade bacterial cell walls, but proteins involved in many other biological functions also contain this domain. It has been reported that the LysM domain functions as a signal for specific plant-bacteria recognition in bacterial pathogenesis. Many of these enzymes are modular and are composed of catalytic units linked to one or several repeats of LysM domains. LysM domains are found in bacteria and eukaryotes. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| CEA14920.1 | 1.21e-213 | 1 | 297 | 1 | 297 |
| SCD21522.1 | 2.16e-109 | 6 | 290 | 11 | 323 |
| QRX64537.1 | 3.82e-88 | 13 | 292 | 13 | 325 |
| BBD46494.1 | 1.36e-86 | 13 | 294 | 4 | 324 |
| SCM59314.1 | 1.83e-84 | 22 | 294 | 13 | 325 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 7CFL_A | 2.80e-23 | 47 | 170 | 17 | 138 | ChainA, Putative cell wall hydrolase phosphatase-associated protein [Clostridioides difficile],7CFL_B Chain B, Putative cell wall hydrolase phosphatase-associated protein [Clostridioides difficile],7CFL_C Chain C, Putative cell wall hydrolase phosphatase-associated protein [Clostridioides difficile],7CFL_D Chain D, Putative cell wall hydrolase phosphatase-associated protein [Clostridioides difficile] |
| 2K1G_A | 4.03e-19 | 47 | 173 | 9 | 127 | SolutionNMR structure of lipoprotein spr from Escherichia coli K12. Northeast Structural Genomics target ER541-37-162 [Escherichia coli K-12] |
| 3H41_A | 2.29e-10 | 35 | 170 | 180 | 310 | CRYSTALSTRUCTURE OF A NLPC/P60 FAMILY PROTEIN (BCE_2878) FROM BACILLUS CEREUS ATCC 10987 AT 1.79 A RESOLUTION [Bacillus cereus ATCC 10987] |
| 6B8C_A | 9.51e-07 | 53 | 143 | 37 | 119 | Crystalstructure of NlpC/p60 domain of peptidoglycan hydrolase SagA [Enterococcus faecium] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| P0AFV6 | 5.61e-18 | 9 | 173 | 9 | 188 | Murein DD-endopeptidase MepS/Murein LD-carboxypeptidase OS=Escherichia coli O157:H7 OX=83334 GN=mepS PE=3 SV=1 |
| P0AFV5 | 5.61e-18 | 9 | 173 | 9 | 188 | Murein DD-endopeptidase MepS/Murein LD-carboxypeptidase OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) OX=199310 GN=mepS PE=3 SV=1 |
| P0AFV4 | 5.61e-18 | 9 | 173 | 9 | 188 | Murein DD-endopeptidase MepS/Murein LD-carboxypeptidase OS=Escherichia coli (strain K12) OX=83333 GN=mepS PE=1 SV=1 |
| P0AFV7 | 5.61e-18 | 9 | 173 | 9 | 188 | Murein DD-endopeptidase MepS/Murein LD-carboxypeptidase OS=Shigella flexneri OX=623 GN=mepS PE=3 SV=1 |
| Q01835 | 1.56e-14 | 32 | 128 | 388 | 476 | Probable endopeptidase p60 OS=Listeria grayi OX=1641 GN=iap PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as LIPO
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.000317 | 0.057532 | 0.941985 | 0.000044 | 0.000063 | 0.000042 |
