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CAZyme Information: MGYG000001506_00019

You are here: Home > Sequence: MGYG000001506_00019

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Neofamilia massiliensis
Lineage Bacteria; Firmicutes_A; Clostridia; Tissierellales; Peptoniphilaceae; Neofamilia; Neofamilia massiliensis
CAZyme ID MGYG000001506_00019
CAZy Family GH171
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
563 MGYG000001506_2|CGC1 63686.42 8.8376
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001506 1920334 Isolate not provided not provided
Gene Location Start: 12707;  End: 14398  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001506_00019.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH171 218 562 9.5e-106 0.9943661971830986

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam07075 DUF1343 2.08e-155 218 562 1 362
Protein of unknown function (DUF1343). This family consists of several hypothetical bacterial proteins of around 400 residues in length. The function of this family is unknown.
COG3876 YbbC 3.74e-117 179 562 11 409
Uncharacterized conserved protein YbbC, DUF1343 family [Function unknown].
cd06309 PBP1_galactofuranose_YtfQ-like 1.18e-06 293 392 54 133
periplasmic binding domain of ABC-type galactofuranose YtfQ-like transport systems. Periplasmic binding domain of ABC-type YtfQ-like transport systems. The YtfQ protein from Escherichia coli is up-regulated under glucose-limited conditions and shares homology with a family of pentose/hexose sugar-binding proteins of the type 1 periplasmic binding protein superfamily. Members of this group are predicted to be involved in the transport of sugar-containing molecules across cellular and organellar membranes; however their ligand specificity is not determined experimentally.
cd06308 PBP1_sensor_kinase-like 2.97e-04 294 397 56 135
periplasmic binding domain of two-component sensor kinase signaling systems. Periplasmic binding domain of two-component sensor kinase signaling systems, some of which are fused with a C-terminal histidine kinase A domain (HisK) and/or a signal receiver domain (REC). Members of this group share homology with a family of pentose/hexose sugar-binding proteins of the type 1 periplasmic binding protein superfamily and are predicted to be involved in sensing of environmental stimuli; their substrate specificities, however, are not known in detail.
pfam07833 Cu_amine_oxidN1 0.001 112 178 23 89
Copper amine oxidase N-terminal domain. Copper amine oxidases catalyze the oxidative deamination of primary amines to the corresponding aldehydes, while reducing molecular oxygen to hydrogen peroxide. These enzymes are dimers of identical subunits, each comprising four domains. The N-terminal domain, which is absent in some amine oxidases, consists of a five-stranded antiparallel beta sheet twisted around an alpha helix. The D1 domains from the two subunits comprise the 'stalk' of the mushroom-shaped dimer, and interact with each other but do not pack tightly against each other.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
VEJ36366.1 9.76e-187 25 563 2 541
CBH20341.1 4.99e-171 198 562 53 417
EFE27594.2 1.26e-164 191 563 49 421
QGU96809.1 1.83e-152 199 562 12 374
ACB84259.1 8.02e-143 183 561 31 408

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4K05_A 1.03e-68 192 563 8 399
Crystalstructure of a DUF1343 family protein (BF0371) from Bacteroides fragilis NCTC 9343 at 1.65 A resolution [Bacteroides fragilis NCTC 9343],4K05_B Crystal structure of a DUF1343 family protein (BF0371) from Bacteroides fragilis NCTC 9343 at 1.65 A resolution [Bacteroides fragilis NCTC 9343]
4JJA_A 3.89e-35 197 563 6 369
Crystalstructure of a DUF1343 family protein (BF0379) from Bacteroides fragilis NCTC 9343 at 1.30 A resolution [Bacteroides fragilis NCTC 9343]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P40407 2.34e-96 188 562 31 414
Uncharacterized protein YbbC OS=Bacillus subtilis (strain 168) OX=224308 GN=ybbC PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.046924 0.937051 0.015238 0.000320 0.000229 0.000225

TMHMM  Annotations      download full data without filtering help

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