You are browsing environment: HUMAN GUT
CAZyme Information: MGYG000001507_00213
You are here: Home > Sequence: MGYG000001507_00213
Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Paenibacillus ihuae | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes; Bacilli; Paenibacillales; Paenibacillaceae; Paenibacillus; Paenibacillus ihuae | |||||||||||
| CAZyme ID | MGYG000001507_00213 | |||||||||||
| CAZy Family | SLH | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
|
|||||||||||
| Genome Property |
|
|||||||||||
| Gene Location | Start: 232182; End: 236975 Strand: + | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH26 | 405 | 743 | 2.1e-68 | 0.9438943894389439 |
| CBM23 | 1082 | 1250 | 6e-36 | 0.9814814814814815 |
| CBM54 | 194 | 305 | 3.3e-33 | 0.9736842105263158 |
| CBM27 | 900 | 1068 | 4.1e-21 | 0.9226190476190477 |
| SLH | 35 | 70 | 7.4e-16 | 0.8333333333333334 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| pfam02156 | Glyco_hydro_26 | 8.02e-49 | 405 | 716 | 1 | 299 | Glycosyl hydrolase family 26. |
| COG4124 | ManB2 | 1.08e-22 | 444 | 720 | 49 | 332 | Beta-mannanase [Carbohydrate transport and metabolism]. |
| NF033190 | inl_like_NEAT_1 | 1.25e-07 | 37 | 140 | 589 | 693 | NEAT domain-containing leucine-rich repeat protein. Members of this family have an N-terminal NEAT (near transporter) domain often associated with iron transport, followed by a leucine-rich repeat region with significant sequence similarity to the internalins of Listeria monocytogenes. However, since Bacillus cereus (from which this protein was described, in PMID:16978259) is not considered an intracellular pathogen, and the function may be iron transport rather than internalization, applying the name "internalin" to this family probably would be misleading. |
| pfam00395 | SLH | 3.35e-07 | 36 | 71 | 7 | 42 | S-layer homology domain. |
| NF033190 | inl_like_NEAT_1 | 2.93e-06 | 50 | 134 | 662 | 748 | NEAT domain-containing leucine-rich repeat protein. Members of this family have an N-terminal NEAT (near transporter) domain often associated with iron transport, followed by a leucine-rich repeat region with significant sequence similarity to the internalins of Listeria monocytogenes. However, since Bacillus cereus (from which this protein was described, in PMID:16978259) is not considered an intracellular pathogen, and the function may be iron transport rather than internalization, applying the name "internalin" to this family probably would be misleading. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QSF45841.1 | 0.0 | 1 | 1597 | 1 | 1597 |
| QKS47282.1 | 0.0 | 37 | 1594 | 52 | 1604 |
| QMV42451.1 | 0.0 | 2 | 1593 | 3 | 1559 |
| ANY66447.1 | 0.0 | 15 | 1595 | 18 | 1569 |
| QQZ63511.1 | 0.0 | 1 | 1433 | 1 | 1414 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 4YN5_A | 1.03e-138 | 397 | 796 | 44 | 441 | Catalyticdomain of Bacillus sp. JAMB-750 GH26 Endo-beta-1,4-mannanase [Bacillus sp. JAMB750] |
| 2BVT_A | 2.76e-110 | 402 | 863 | 6 | 451 | Thestructure of a modular endo-beta-1,4-mannanase from Cellulomonas fimi explains the product specificity of glycoside hydrolase family 26 mannanases. [Cellulomonas fimi],2BVT_B The structure of a modular endo-beta-1,4-mannanase from Cellulomonas fimi explains the product specificity of glycoside hydrolase family 26 mannanases. [Cellulomonas fimi],2BVY_A The structure and characterization of a modular endo-beta-1,4-mannanase from Cellulomonas fimi [Cellulomonas fimi] |
| 2X2Y_A | 1.72e-108 | 402 | 863 | 6 | 451 | Cellulomonasfimi endo-beta-1,4-mannanase double mutant [Cellulomonas fimi],2X2Y_B Cellulomonas fimi endo-beta-1,4-mannanase double mutant [Cellulomonas fimi] |
| 3TP4_A | 3.21e-98 | 402 | 863 | 6 | 451 | CrystalStructure of engineered protein at the resolution 1.98A, Northeast Structural Genomics Consortium Target OR128 [synthetic construct],3TP4_B Crystal Structure of engineered protein at the resolution 1.98A, Northeast Structural Genomics Consortium Target OR128 [synthetic construct] |
| 1J9Y_A | 2.44e-81 | 402 | 773 | 9 | 374 | Crystalstructure of mannanase 26A from Pseudomonas cellulosa [Cellvibrio japonicus] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| A1A278 | 1.46e-80 | 402 | 812 | 40 | 436 | Mannan endo-1,4-beta-mannosidase OS=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) OX=367928 GN=BAD_1030 PE=1 SV=1 |
| P49424 | 4.17e-80 | 402 | 773 | 47 | 412 | Mannan endo-1,4-beta-mannosidase OS=Cellvibrio japonicus (strain Ueda107) OX=498211 GN=manA PE=1 SV=2 |
| C6CRV0 | 4.03e-20 | 38 | 198 | 1291 | 1458 | Endo-1,4-beta-xylanase A OS=Paenibacillus sp. (strain JDR-2) OX=324057 GN=xynA1 PE=1 SV=1 |
| Q06852 | 7.84e-18 | 52 | 199 | 2104 | 2264 | Cell surface glycoprotein 1 OS=Acetivibrio thermocellus (strain ATCC 27405 / DSM 1237 / JCM 9322 / NBRC 103400 / NCIMB 10682 / NRRL B-4536 / VPI 7372) OX=203119 GN=olpB PE=3 SV=2 |
| O05512 | 1.78e-16 | 398 | 651 | 25 | 268 | Mannan endo-1,4-beta-mannosidase OS=Bacillus subtilis (strain 168) OX=224308 GN=gmuG PE=1 SV=2 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.000261 | 0.999032 | 0.000215 | 0.000165 | 0.000159 | 0.000144 |
